CI01000016_11344848_11345696


Basic Information

Item Value
gene id CI01000016_11344848_11345696
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 11344452 ~ 11345869 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_11344848_11345696.mRNA
GCATAATAAGTTTCATTTTTGTCATAAACAGGACCACTGCACAGCCTCCATGGACTGAGATGGTGACCAACAGCACCCTTGATCTAAATTATTATGCATCATCCAGGTGAGGACATATCATATTTTTTAGTTAACAGTTGAAGGAGAAGCTCTGCTTTGCTCATATATTTTTTTTCCTATTCAATTGTGAATGGACAACGTGCTGATGATGACTACTACGATGACTACTATGATGACTACTATGCTCAAAACATTGACCAGTCTGCGTTTTCCTGTAATTATGGAGATCATATAGCTAGCTTCCTTCCTGTGTTATACTCCCTGTTTTTTGTGGTGGGCTTTCTGGGTAACACACTTGTGATCTGGGTGGTCTTGATGGGTATGAAGCTGAGAAGCATGACTGACATCTGTCTCTTGAACCTGGCTTTATCTGACCTGCTCTTGGTCTCCTCCCTTCCCTTCCTGGCACACTATGCCAGAGACCAGTGGATCTTTGGAAATGTCATGTGCACTATGGTCCTTAGTGTCTACCACATCGGATTCTACAGTGGGATATTCTTTATAGTATTGATGAGTGTTGATCGATACTTAGTTGTAGTTCATCCTGTGTTTGCCTTGAGAGTCAGAACAAGGACATATAGGATCTTAGCCAGTATGGTCACATGGATCATTGCTGTTTTTGCATCCTTTCCTGAGTTGCTGTACCTCAAAACCACAGATATAAATAATCAAAAGCTTTGTACAGATTATCACCCTTCTAATCATTCTTCAAAGATAATTGGTATCTTTAAAATGAATGTCATTGGTTTAATTATCCCACTTATTGTGATTGGATTTTGTTACTCATTGATTCTAAGCAGACTCCTGACAGTTCGCTCTTCCAGGAGGCAGGCCATGCTTCTAGTTATTGTGGTGATGGTGGTCTTCTTTTGCTGTTGGGCTCCATACAATGTTGCAGCTTTTGTGAAAGCCTTAGAGATAAAAGAATACATACCTCATTCCTGTGAGAGCAGTAAGGCAATCAGTCTAAGTCTACAGATCACAGAAGCTTTGGCTTACTCACACAGCTGCCTGAATCCAGTTCTCTATGTGTTTGTGGGAGGGAAATTTAAGAGGCATCTTTTTAGACTGCTGTACAAGACACCCTTAAGTAGATTGCAGTTCATGCAGAATTATATTACACCAGCCACAGGATCTGTTTATTTACATTCCACTAGTGTGGATGAGAGATCCGCTGCAGTGTAAGTGGAACATTAATTGGAGTAGGGAATACAGGCAAAAGGAAAAAAAAGGAAAAGAAAATTCTAATAAGGTTTTACTTGGATAAAGAGAAAAAAGTGTTTTTTACTCTTAGTGGCTTTTTTGTTTACTAATGCTATAATTAGATGAACTGTATTTTGTAAGAAAAAACACCTTTA

Function

NR:

description
chemokine receptor 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_11344848_11345696.mRNA False 1418 mRNA 0.39 1 11344452 11345869

Neighbor

gene id symbol gene type direction distance location
CI01000016_11330944_11334103 NA coding upstream 9986 11330213 ~ 11334466 (+)
CI01000016_11311430_11313782 NA coding upstream 30372 11310881 ~ 11314080 (+)
CI01000016_11298638_11300240 NA coding upstream 43946 11297670 ~ 11300506 (+)
CI01000016_11277549_11278592 NA coding upstream 65597 11276555 ~ 11278855 (+)
CI01000016_10967556_10968779 NA coding upstream 375137 10967556 ~ 10969416 (+)
CI01000016_11499086_11499455 NA coding downstream 153009 11498878 ~ 11499609 (+)
CI01000016_11554406_11667350 DNAH5 coding downstream 208537 11554406 ~ 11667727 (+)
CI01000016_11949149_11958553 CA14 coding downstream 603280 11949149 ~ 11958718 (+)
CI01000016_12006986_12008107 NA coding downstream 660491 12006360 ~ 12009146 (+)
CI01000016_12012874_12083297 TAF2 coding downstream 667005 12012874 ~ 12083297 (+)
G99854 NA non-coding upstream 21849 11321759 ~ 11322603 (+)
G99853 NA non-coding upstream 22797 11320764 ~ 11321655 (+)
G99781 NA non-coding upstream 187848 11151614 ~ 11156604 (+)
G99780 NA non-coding upstream 193292 11150853 ~ 11151160 (+)
G99779 NA non-coding upstream 193708 11150438 ~ 11150744 (+)
G99873 NA non-coding downstream 3186 11349055 ~ 11349267 (+)
G99864 NA non-coding downstream 11153 11357022 ~ 11360234 (+)
G99862 NA non-coding downstream 28009 11373878 ~ 11379117 (+)
G99884 NA non-coding downstream 48956 11394825 ~ 11395599 (+)
G100010 NA non-coding downstream 272919 11618788 ~ 11618990 (+)
G99456 NA other upstream 1045548 10294391 ~ 10298904 (+)
G99410 NA other upstream 1107601 10234400 ~ 10236851 (+)
G99041 NA other upstream 1418798 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 1547512 9795950 ~ 9842576 (+)
G98288 NA other upstream 2341735 8996098 ~ 9002717 (+)
G99940 NA other downstream 325776 11671645 ~ 11672873 (+)
G100178 NA other downstream 814772 12160641 ~ 12162845 (+)

Expression


Co-expression Network