CI01000016_11499086_11499455


Basic Information

Item Value
gene id CI01000016_11499086_11499455
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 11498878 ~ 11499609 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_11499086_11499455.mRNA
CTATAAAGGCAATTGCATAGGCTACATAAGAGCATGAACAAAACATTATTTTAAAGCACACCAAATCCAGCATTTTACACAAAGAAATTCCAAATCCAATCCCAACAAAGACACTGAAATAGACTGTAAGCATGCAATCTATTTTGAAATAGGACATCATCATGGGTAATCAACAGTGAACTGTATTTGAAACGTTAATCAAGAGCATATGAGTGGCACAAATCCAAATGCAATCCCTATGACGCTGTATTACGCAGTAACACAACAAACTGCACAGTCACAGCAGGTATCACAGAAACATCACTTACAAATCCCTGCAGAGAGGATCTGCAAGGCCATTATTCCTTATCCGAAGCATCCAGCAAAAATCTCCCGCCATAAACACACTCAGCAGCTGTATCAATACAAGGGGCCCAGCACGCAGCTCTGTGACAGAACCCATTATGATCTCATGGTTTGCCATTGGGCGAGGGCTATTCTCAGTATGATCTGATTGGTTAGTGAAGTGGTTGGGGGCAGGGCTGATCAGATGGTGGTGATCTGAGCACCAGAGACATGGACCCAGCTGACTTGCATGGATGCTTTCAAGGAAGAGGCAGCAGTGTCATGTGCTTATAGGTCTTGTGTGAATGTTTCACTGGAAGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_11499086_11499455.mRNA True 647 mRNA 0.43 2 11498878 11499609

Neighbor

gene id symbol gene type direction distance location
CI01000016_11344848_11345696 NA coding upstream 153009 11344452 ~ 11345869 (+)
CI01000016_11330944_11334103 NA coding upstream 164412 11330213 ~ 11334466 (+)
CI01000016_11311430_11313782 NA coding upstream 184798 11310881 ~ 11314080 (+)
CI01000016_11298638_11300240 NA coding upstream 198372 11297670 ~ 11300506 (+)
CI01000016_11277549_11278592 NA coding upstream 220023 11276555 ~ 11278855 (+)
CI01000016_11554406_11667350 DNAH5 coding downstream 54797 11554406 ~ 11667727 (+)
CI01000016_11949149_11958553 CA14 coding downstream 449540 11949149 ~ 11958718 (+)
CI01000016_12006986_12008107 NA coding downstream 506751 12006360 ~ 12009146 (+)
CI01000016_12012874_12083297 TAF2 coding downstream 513265 12012874 ~ 12083297 (+)
CI01000016_12087864_12111652 ENPP2 coding downstream 588255 12087864 ~ 12111772 (+)
G99884 NA non-coding upstream 103279 11394825 ~ 11395599 (+)
G99862 NA non-coding upstream 119761 11373878 ~ 11379117 (+)
G99864 NA non-coding upstream 138644 11357022 ~ 11360234 (+)
G99873 NA non-coding upstream 149611 11349055 ~ 11349267 (+)
G99865 NA non-coding upstream 153875 11327295 ~ 11327387 (+)
G100010 NA non-coding downstream 119179 11618788 ~ 11618990 (+)
G100046 NA non-coding downstream 190486 11690095 ~ 11696461 (+)
G99971 NA non-coding downstream 398377 11897986 ~ 11900048 (+)
G100149 NA non-coding downstream 490560 11990169 ~ 11991067 (+)
G100162 NA non-coding downstream 643376 12142985 ~ 12143342 (+)
G99456 NA other upstream 1199974 10294391 ~ 10298904 (+)
G99410 NA other upstream 1262027 10234400 ~ 10236851 (+)
G99041 NA other upstream 1573224 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 1701938 9795950 ~ 9842576 (+)
G98288 NA other upstream 2496161 8996098 ~ 9002717 (+)
G99940 NA other downstream 172036 11671645 ~ 11672873 (+)
G100178 NA other downstream 661032 12160641 ~ 12162845 (+)

Expression


Co-expression Network