CI01000016_11949149_11958553 (CA14)


Basic Information

Item Value
gene id CI01000016_11949149_11958553
gene name CA14
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 11949149 ~ 11958718 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_11949149_11958553.mRNA
TGTGTGGAGTGCTCAGGAACTGCAAAAGAATGGACATATGCAGGTGCAGTGGGACAGCCAGAATGGGCTGAGTTTTTTCCTGACTGTGGTGGTTCTATTCAGTCACCCATAAATTTGGACACATCGCAAACACAACATGACCCAACGCTAATCCCTGTGCAGCCCCTGGGATACAACCAGCCTGGTAACAGACCATTCACCCTCTCCAATAATGGCCATACAGTGCAGATGACATTGCCACATTGGATGGGCTTGGCTGGGTTGCCATGGCATTATAGTGCTGTACAGCTGCACTTGCACTGGGGTAATGGAGTGGGCGTAGCTACAGGAAGTGAACACACCATTAATGGACAGAGCACTTCCGCAGAGCTCCATATTGTCCATTACAATGCAGAGGTTTATGCTAATATGTCACAAGCTAAGACCCAAGAGAACGGCCTGGCTGTGTTAGGGATCCTAATTGAGGCAGGCGAAGAGATTAATCAGGCATATGGCCAAAAGGTGGCTATCCCTGCATTTGATATACAGGCACTGCTGCCTGACAACCTCAGCCAATATTTCCGCTACAATGGCTCACTCACTACTCCACCCTGCCACCAGAGTGTCCTCTGGACCATCTTCAATGAAAGGGTGAAAATCTCTCATTCACAGGTACAGAAGGACTGTGTTAAAGCTCAAGCAATGCTAACTTTTTGTATTCATTAGTTCAGTCATGACAATTCGTGAGATAAACTGTCATATTACTGGATATGACAGTAGTGGCCTTTGTGTAATATATCTTCTTAGGCTGCTGCTGCAAAGCAAGTAGAAAGACATCCAAAGAAATGCTGCGGCTATCATGTAAAAAATGTTATTAATAATTAGTCATAA

Function

symbol description
ca14 Predicted to enable carbonate dehydratase activity. Acts upstream of or within lens development in camera-type eye. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in brain. Orthologous to human CA14 (carbonic anhydrase 14).

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K01672 CA; carbonic anhydrase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_11949149_11958553.mRNA True 870 mRNA 0.45 7 11949149 11958718

Neighbor

gene id symbol gene type direction distance location
CI01000016_11554406_11667350 DNAH5 coding upstream 281422 11554406 ~ 11667727 (+)
CI01000016_11499086_11499455 NA coding upstream 449540 11498878 ~ 11499609 (+)
CI01000016_11344848_11345696 NA coding upstream 603280 11344452 ~ 11345869 (+)
CI01000016_11330944_11334103 NA coding upstream 614683 11330213 ~ 11334466 (+)
CI01000016_11311430_11313782 NA coding upstream 635069 11310881 ~ 11314080 (+)
CI01000016_12006986_12008107 NA coding downstream 47642 12006360 ~ 12009146 (+)
CI01000016_12012874_12083297 TAF2 coding downstream 54156 12012874 ~ 12083297 (+)
CI01000016_12087864_12111652 ENPP2 coding downstream 129146 12087864 ~ 12111772 (+)
CI01000016_12124439_12128957 NA coding downstream 164867 12123585 ~ 12129766 (+)
G99971 NA non-coding upstream 49101 11897986 ~ 11900048 (+)
G100046 NA non-coding upstream 252688 11690095 ~ 11696461 (+)
G100010 NA non-coding upstream 330159 11618788 ~ 11618990 (+)
G99884 NA non-coding upstream 553550 11394825 ~ 11395599 (+)
G99862 NA non-coding upstream 570032 11373878 ~ 11379117 (+)
G100149 NA non-coding downstream 31451 11990169 ~ 11991067 (+)
G100162 NA non-coding downstream 184267 12142985 ~ 12143342 (+)
G100164 NA non-coding downstream 189800 12148518 ~ 12148815 (+)
G100173 NA non-coding downstream 198302 12157020 ~ 12157594 (+)
G100176 NA non-coding downstream 200164 12158882 ~ 12159090 (+)
G99940 NA other upstream 276276 11671645 ~ 11672873 (+)
G99456 NA other upstream 1650245 10294391 ~ 10298904 (+)
G99410 NA other upstream 1712298 10234400 ~ 10236851 (+)
G99041 NA other upstream 2023495 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 2152209 9795950 ~ 9842576 (+)
G100178 NA other downstream 201923 12160641 ~ 12162845 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location