CI01000016_12006986_12008107


Basic Information

Item Value
gene id CI01000016_12006986_12008107
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 12006360 ~ 12009146 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_12006986_12008107.mRNA
ATATAAAAGAGCGTTCACTTATCTAAGTGAACTTATCTATTTCAGATGCTTTGTGAAAGCATGCTATAGACTGATAACAGCAAACAATGGCAAGTATTTGAATACTGAGCAGCAAGCTCATTGGCTGCTGATGCCACAGCAACCAATCACCTGCTCTATGTAGATAATGATGTGATCGCTACAACAAGTTAAGGACCTATCAGCCTGCATCATCTAGAATTTCATTACAGAACTTTGTATCTAAGATCTATATCTATGTTTAAAATTTCATCTTAATGTGTTTATAAGGCCACCAAGTGTGTGTGATTTTTGTATACGAGTAATTTCAATTGTTCTTACCTTTTTTCGTAAATTTAGAATACATTTTAGAATGAAAGTTATTTATGAATCATAATTTGATCGTGAAAACATTAATACGCAGATTTCACATGCAAATTTGCGCATACGCATGCTTAGTAAATGAGACCCATTGTTTTTTTTGTCAAGGTTTCTATAGAATTTGCGATATATTGTTACCATGAATTCTTTTGGCCATGATAACCGTGGTATGAAAAATATGATATTGTGACAGCTCTACTTGGAGCATTACAGTTAAGTACATTTAAAATTATTAGTTACTGTCAAAAATGGAGTTCTGTTTTCCTTACAGTTTCTTTTTCTGCTCAAATGATAGTAAGAATGGAGTATTGGATGATGAGCCAGATACTGATGTGCCATATGACTATGATGACTACTACGCTGGAAATGTTGATTCATCTGCGTTTTCCTGTGTTTATGGAGAACATGGAGCCAGCATTCTTCCAGTGTTATACTCCCTTTTTTTTGTGGTGGGCTTTCTGGGTAACGTGGTGGTCTGTGTGGTCTCCATGGGTGTCAAACTGAGAAGCATGACTGACATCTGTCTCCTGAACCTGGCTTTATCTGACCTGCTCTTGGTCTCCTCCCTTCCCTTCCTGGCACACTATGCCAGAGACCAGTGGATCTTTGGAGATGTCATGTGCACTATGGTCCTCAGTGTCTACCACATCGGATTCTACAGTGGGATATTCTTCATTGTACTGATGAGTGTTGATCGATACTTAGCTGTAGTTCATCCTGTGTTTGCCTTGAGAGTCAGAACAAGGACATATGGGATCTTAGCCTGTGTGGTCATGTGGATTGTTGCTGTTTCTGCATCCTTTCCTGAGTTGATGCACTTGAAAACCACAGATTATAATGAACAAAAACATTGCACATCTTATCCAACAAATGATCAAAATTCTCATATTTTTTTGAGGACTTTTGGTATCTTGAAAATGAATATCATTGGTTTAATTCTCCCGCTTATTGTGATTGGATTTTGTTACTCAGTGATTCTGAAGAGACTCCTGACAGCACACTCTTCCAGGAGGCAGGCCATGCATCTTGTCATTGTGGTGATGGTGGTCTTCTTCTGTTGTTGGGTTCCATACAATGTCACAGCTTTTATAAAAGCCTTAGAGCTGAATGAACTCATAACTCAGTCTTGTGACAGCAGTAAGGCAATCAGTCTAAGTCTACAGATAACAGAAGCTTTGGCTTACTCACACAGCTGCCTGAATCCCATTATCTATGCATTTGTGAGAGAGAAGTTTAGGAGGCACCTTTTCAGACTCCTGTACAGGACACCCTTGAGTAGACTGCAATTCATGAAGAACTACCTTACACAGGCCACAGTATCAGTTTATTCACATAAAACTAATGATGAGAAAACTAGTACAACAGTGTGAATTGGAAAAAGACTGTCAAAAAGAAATTTAAAGTTTATAAAATTTATATGGTTATACTTAATTTTGTTTTGAATCTACCAGCATTGGTGTAGTGGAGATTGTAAAAGGTTGAATCATTACTATTAATTCAAGCAGTTTATCACTTGCAAACTATAGATTGCTTTAAAAGTACTTTCATACCATATGAAAAAGCATAATGAATTGCAGACGAATAATCCTTTTACACCAAGAGCAGATGCATCAGTCTGAAGGAAACGCAAGTTCACAACTGTACATCAGAGGGCACAACACAAGCACACCATTACAAATAACAGAATGCGGGAGAGACAAATTCAACTAATGTTCCTTTTAAGGCAAGTCAGTTCACTCATTGGCCATCTTGGGAATGCATTTGTCATGCAAGTGCAGCTTCTAACTTTACAGGTGTTTCCATCTGGAGTTTACAACAGCAGATATATAATGATGTATTCATTCAACAGCAAGAACTGTTGTAAACACCAGGCAGTGGCATTGGCTCTTTTATTTGGAAGGCGGAACTTATTTACTAGACCTGCCATATTGGGTGTTCAAATTTCTCATTGTAACGCCATTGGCCTTGGCTTTAAATGGTCTCTTCAATGAAAAAGTTTTGTATTTAACTTATATGTAATTCATGAGGTAACATCTACATTTTGTTGAAGTGTAAGCAATTGTGTAAGATTATTGAATATGTAACTGAATTCAACCAACCTGAAATATTTTACCAAGGCAGTATATTTTGATTTGTCCTGCTCAAATAATCACTTAGTAAGTTTGATATAATCTGTTTTTGTTTATAGGATGAAACTCTATTTTCATCTTGATGTAATTACATTGTTATCTCAAATACCATTTTCACAGACTTCTTACAAATTAGTTATCTTTTTATGCAACCTTTTATGTAACCTGTCTTATATGAGAATCCCTGTATATAAATATTATTTATGTTAAATAAATGTTACTATAACAAGTAAGAAAAGAGTTGCTGCACGTAACTCAAATTAAAAAGAGAACATGTGGA

Function

NR:

description
chemokine receptor 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_12006986_12008107.mRNA True 2787 mRNA 0.36 1 12006360 12009146

Neighbor

gene id symbol gene type direction distance location
CI01000016_11949149_11958553 CA14 coding upstream 47642 11949149 ~ 11958718 (+)
CI01000016_11554406_11667350 DNAH5 coding upstream 338633 11554406 ~ 11667727 (+)
CI01000016_11499086_11499455 NA coding upstream 506751 11498878 ~ 11499609 (+)
CI01000016_11344848_11345696 NA coding upstream 660491 11344452 ~ 11345869 (+)
CI01000016_11330944_11334103 NA coding upstream 671894 11330213 ~ 11334466 (+)
CI01000016_12012874_12083297 TAF2 coding downstream 3728 12012874 ~ 12083297 (+)
CI01000016_12087864_12111652 ENPP2 coding downstream 78718 12087864 ~ 12111772 (+)
CI01000016_12124439_12128957 NA coding downstream 114439 12123585 ~ 12129766 (+)
G100149 NA non-coding upstream 15293 11990169 ~ 11991067 (+)
G99971 NA non-coding upstream 106312 11897986 ~ 11900048 (+)
G100046 NA non-coding upstream 309899 11690095 ~ 11696461 (+)
G100010 NA non-coding upstream 387370 11618788 ~ 11618990 (+)
G99884 NA non-coding upstream 610761 11394825 ~ 11395599 (+)
G100162 NA non-coding downstream 133839 12142985 ~ 12143342 (+)
G100164 NA non-coding downstream 139372 12148518 ~ 12148815 (+)
G100173 NA non-coding downstream 147874 12157020 ~ 12157594 (+)
G100176 NA non-coding downstream 149736 12158882 ~ 12159090 (+)
G100178 NA non-coding downstream 151495 12160641 ~ 12162845 (+)
G99940 NA other upstream 333487 11671645 ~ 11672873 (+)
G99456 NA other upstream 1707456 10294391 ~ 10298904 (+)
G99410 NA other upstream 1769509 10234400 ~ 10236851 (+)
G99041 NA other upstream 2080706 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 2209420 9795950 ~ 9842576 (+)

Expression


Co-expression Network