CI01000016_12116368_12123187



Basic Information


Item Value
gene id CI01000016_12116368_12123187
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 12116302 ~ 12123298 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000016_12116368_12123187.mRNA
ACAACCCGTACTTTTAGGAAGTGGACATTGGAGGGCAGTAAGTCACTTAAGGACTGTTTTGAATGCACTGAATGGAATGTATTGCTGGAGGCTGAGGAAAACAGTAGTGATATGGACATCAATGGGATGGTTGGCCGTGTTACTGATTACATTAATTTCTGCTGGGACATTGTTATACCAGGAAGGACTGTACGCTGTTTTGCTAACAACAAACCTTGGATTACTGGTGACATTAAGGCACTGCTCAATCAGAAAAAGCAGGCATTTAAGGAAGGAGACTGGGATAAGATCAGATGTGTTCAACATGAGCTGAAGAAAAGTCTAAGGCAGGCAAAGTTGGACTATAAAAGTAAAGTGGAGAGGAAGTTGCAACATCAGAAAGGACTCAATGAGCAGTCTAAGGCACGCTTGCCTGTGGAAGGTCCTCGAGGGATGTTTGTGGCTTATTTGGAGCGGGTATTCCTGCAGTGCAGATCCTCCTTCACTGTATGTGAGGCAGAAGAGGAGGACCACTTCAGTCCCGCCACGGGCCCAGCGATGAACCCCGTGACTGCCACGGAACTAGAACCCAAGTCTGAGCCTGCCATGGACCCCACACTAGAGCCCACTCCAGCGATGGAACCAGAGTCAGCCACCACATCCATCCTGGAGCCAGAGCTGGCCACAATATCACTACAAAGGCCAGAGCTTACTGCCAGGAGTTCCTGGGGGCCATTATGGTTTAGTAAAAACTCATGATTTCCTAAAAGATACAAACCAGTCCAGCAAACCTTATAATACTATTTGTAAACACCTTATCATAAA

Function


NR:

description
ReO_6

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000016_12116368_12123187.mRNA True 804 mRNA 0.47 3 12116302 12123298
Loading

Neighbor


gene id symbol gene type direction distance location
CI01000016_11938043_11946368 NA coding downstream 169741 11937447 ~ 11946561 (-)
CI01000016_11908468_11923802 PRPF3 coding downstream 190537 11907727 ~ 11925765 (-)
CI01000016_11876020_11896223 ICE1 coding downstream 220079 11875492 ~ 11896223 (-)
CI01000016_11866962_11874982 PAPD7 coding downstream 241320 11865984 ~ 11874982 (-)
CI01000016_11670870_11794943 ADCY2A coding downstream 321219 11670818 ~ 11795083 (-)
CI01000016_12137876_12146233 NA coding upstream 14476 12137774 ~ 12147884 (-)
G100712 NA non-coding downstream 116275 11999700 ~ 12000027 (-)
G100701 NA non-coding downstream 133995 11982076 ~ 11982307 (-)
G100679 NA non-coding downstream 168474 11947221 ~ 11947828 (-)
G100670 NA non-coding downstream 214957 11901106 ~ 11901345 (-)
G100669 NA non-coding downstream 215441 11900642 ~ 11900861 (-)
G100722 NA non-coding upstream 37457 12160755 ~ 12161232 (-)
G100190 NA other downstream 2063913 10051168 ~ 10052389 (-)
G99178 NA other downstream 2301347 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 2603874 9509622 ~ 9512428 (-)
G98691 NA other downstream 2858691 9256102 ~ 9257611 (-)
G98679 NA other downstream 2876373 9234996 ~ 9239929 (-)

Expression


CI01000016_12116368_12123187 Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.3.
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CI01000016_12116368_12123187 Expression in each Bioproject

Bar chart with 21 bars.
CI01000016_12116368_12123187 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 10.
End of interactive chart.

Co-expression Network