CI01000016_12124439_12128957


Basic Information

Item Value
gene id CI01000016_12124439_12128957
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 12123585 ~ 12129766 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_12124439_12128957.mRNA
CCATATAAACAAGCGAGGACATAATCAGAAACCAAAGATGTTTTATGGAATTTTAGTTTGTATCACCTTGTTTTCCTGTGTTCTGTTCCTGTTTTCTTTGTTTCCCACATTAAACAGCTTGTTCCCCTGACTGTTGATGGTCCTCAAGGGAAATATATGGATTTTGTTGAACTGATACTCGTTACACCTGCTGATACACCTGCCATGGACAATGAGCCAAAGCCCACCACGATGCCAGAACCAAAGCGAATGCCTGAGGTCATTTTTATCCCGGAGCCTGAGCCTGACCAGTCTGCGAAAGCTGGCACCAACTTCTGTCCCTGTGGCTATTTTAGTGGAGAGAGATGGCATGGAGTGGAACTCCGCCCATACTCCCACTACTGAGGAGAGTTTGATGTGTCCAGTCCATACCGGAATATGATTGACTATGCCAGTTCACAATGCCTCCAGGCTCCATTGGTCTCGTCCAGCCCCTGTCTCCTTCATCACCTCTGGTTCTGCCCATTCTACTGTCTCCTTCGTTGAGGTTGGCTCCACCCAGGTTCCACCCTCTCTCCCTCCTCTTCTGCCAAATCTCTCCAGCTCGTAGCCTTCATCTCTGCTGGCTCCATTCAGCTCTTCGGCTGAATGGTGGCTCCACCCACCTCTTCAGTTTCGCCACTAATGTCTCCTTTGAGCTCCTCTCCTCTACCTTCAGTGGCTCTGCCATTCTCCTTGGCTCTGCCTTGGGCTTCCTGATCTCCAGCCCAGCCTTGGTTTAAGGATCCACCGGCTCCACCTCAGTTATACAGTTATAGGTCACTGAACAAATATGCAAATTTGTGACACTGCTATGTGTGCATGTAACCTGCATAATGAATTTGTATCATTACCATCAAACCAGAGGTGTGTGGGGTTATTTCCAGAAATCACTTGTTAAACGTTATGCTAGTGAGAGAAATGGAGTGAATGTGGTCGTCGGGCCCATCTTCGACTATGACTACAATGGTCTTAGAGATTCAGCAGAGACAATAAAACAATATGTCAGTGGCTCTGTGCAAATCCCAACTCATTACTACATTGTTGTTACAAGTTGTCTGGATTACACACAAACTGTTGACTCCTGTGCTGGCCCTCTCAGTGTGTTCTCTTTCATCCTTCCACACCGATCAGATAATGATGAGACCTGTAATAGTTCAGAAGACGAGTCAAAGTGGGTGGAGGAACTAATGAAGACACACACAGCACGCCTACGGGATGTGGAGTTACTTACAGGACTAGACTTTTATCGTCGCACCAGTAGAACCTATGAGGAGATTCTCTCTCTAAAAGTGTACTTGCACACATACGAGAGTGAGATCTAAACCACTGCATTCCTGCATTAGCATTCCCTACATCTTAACTGTCAGGATGCATAAGTAAGGTGTATATTTTTATAGAATCTATTATATTTATTTTTGGTTGCCCTTTATTTTAAGGTGTCCGTGTTACAGTGCAGCTATACATTTAAGTACTGAGCAATAGTAATTAGCTACATGTACTTACTATAGGGTTAGGGTGTGGTTTAGGGTTAGTTGCATGTAATTATGCACAATTTATAGTAATCAGTATTATAACTACATGTAACATGTAATAAAGACACTGTAAAATAAAGTGTTACCTTATTTTTTTTTTATAGCTAGTCCTTAAGTGTTTTTTTTTTACATTCTCCTACTTTATGACCGTAAATTATAAGCATGAGTAAACTTTTTTTTGTTTATGAATTTTGTAATAATACTGTATAAATGTGTTGACCGTGATGTTTAATGTGCTCAAAGTAACCGTCTTTACTGTAAACTGTTATGAAACCTGTTCTGTTTTAACATTTGCAAAATGTTTTGTTTCAATTTTATGCCATTAAAGTTATTCTGCTTGTTTTAAAGAAAATAGCTCAGACTGGTGGTTATATGGCAGTTTGCAGGTTATTGTCCAACAAGAGATTACTTCTTGGATACCTTTGTTGTTCACAATGTTTTATTTTATGGATCATCTATAAACATAACAGCCTTGGGTTGAGTTTTTGTATCTTTCGTCCAGAGTTCATTACATTAAGCAGTATTTTGGTTTCAAGTAAACATTAAATTAATGAAGGCAGGCAGGACTTGAGGTTTTACTTACTGTGGAATCCTCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_12124439_12128957.mRNA True 2152 mRNA 0.41 4 12123585 12129766

Neighbor

gene id symbol gene type direction distance location
CI01000016_12087864_12111652 ENPP2 coding upstream 11813 12087864 ~ 12111772 (+)
CI01000016_12012874_12083297 TAF2 coding upstream 40288 12012874 ~ 12083297 (+)
CI01000016_12006986_12008107 NA coding upstream 114439 12006360 ~ 12009146 (+)
CI01000016_11949149_11958553 CA14 coding upstream 164867 11949149 ~ 11958718 (+)
CI01000016_11554406_11667350 DNAH5 coding upstream 455858 11554406 ~ 11667727 (+)
G100149 NA non-coding upstream 132518 11990169 ~ 11991067 (+)
G99971 NA non-coding upstream 223537 11897986 ~ 11900048 (+)
G100046 NA non-coding upstream 427124 11690095 ~ 11696461 (+)
G100010 NA non-coding upstream 504595 11618788 ~ 11618990 (+)
G99884 NA non-coding upstream 727986 11394825 ~ 11395599 (+)
G100162 NA non-coding downstream 13219 12142985 ~ 12143342 (+)
G100164 NA non-coding downstream 18752 12148518 ~ 12148815 (+)
G100173 NA non-coding downstream 27254 12157020 ~ 12157594 (+)
G100176 NA non-coding downstream 29116 12158882 ~ 12159090 (+)
G100178 NA non-coding downstream 30875 12160641 ~ 12162845 (+)
G99940 NA other upstream 450712 11671645 ~ 11672873 (+)
G99456 NA other upstream 1824681 10294391 ~ 10298904 (+)
G99410 NA other upstream 1886734 10234400 ~ 10236851 (+)
G99041 NA other upstream 2197931 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 2326645 9795950 ~ 9842576 (+)

Expression


Co-expression Network