CI01000016_12137876_12146233


Basic Information

Item Value
gene id CI01000016_12137876_12146233
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 12137774 ~ 12147884 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_12137876_12146233.mRNA
AGTCTGGAGGGGCACAGCGAACCAGTCTATAAACAAAGTACTATCTACTTTTTTCAGCTTCCAGTGTAAAACTATTTGACTAGCAGTAAATTATGTCATGGGCAGAGTGCCCATTCATACACAGCTAATTTATAAGACATTCTACTCCTATCTAGGACCTCTGCCAGCTCAGATTGGACACAACATAATATTTTTAGGATTTAAGAAGGTTAGTGTTTCATTAATAAATGCCAAAAACTACACAAGGAATGAATGGAATGAAAATATGTCAAACAGAAATAATGTGGAAACTTCTCTGACTAACAACTCTATCCACATTGACGTATTACTGGAAATGGCCACTTGTCTCAGATCGAAAATGTCTTTTCCAGGCTGTTCAGAATTAGATCTATTATAAAGCCTCATGTACAAACATTTCATACACTGCCATTATAAAAGGTGCTGTCCCTGATCGCAAATCAAATAGCTACGTTGCCATCTCTATGCGTCTCTCAGAAACCAAACCAGCTCTCTGTCAAAAGTAGCCTAATAATCAACTAAGATACTGAATTATACACATTTTCTACTACTTAATATGTATATTTAAATGTTTTAAACCTTGTGCGATATGATAGGTTACATCATATTTCTTTGTCTCACTCTTATGTAGGCTATTCTTCAGATTTGCATTTGTATGCATAGTAAAAGTTAATATAGCAATTTTCAACCACTGAATATTTTCTTTCAACCTTATGTTCTCTAATCTACGGAGCCCCGCACATGACACACAAGAAAAAAAATTAAATCGTGCGCACGATTTACTATTTCGTTCCCTCGATTTACTAAATCATGCGCATGATTTATAAATCGAGGGAACGAATTAGTAATTCGTGCACACGATTTAGTAAATTGAGGGGACGAATTAGTAATTCGTGTGCACGATTTAGCCAACTATTTTTTTCCTGCATGTCATGTCCAGGGCTCCGTACTTATCAGCTTATAGAGTACCTCAGGGATGACGTGTTTTAGGACTTTTAGGACATTTTAGGACTTCCGATTCCATCGCCCCGAAGTCAGTGGGTCTGTGGTTAACAAAGCCTCTAAATATTTTCACGTTTTGATCTATGACATAAAACACACCAGTTATAACCTGCTTCCCTGCTGAAAAAACCAGCATATGCTGGTTAAGGTAGGTTTTGGAGCTGGTATGCTGGTTTGAGCTGGTTTATGCTGGTCCTATGCTGGTCCCATGCTGGTCCTATGCTGGTCCATGCTGGTCCTAAGCTGGTTCATGCTGGTCCTGAGCTGGTCCTATGCTGGTCCATGCTGGTCCTGGACCAGCATAGGACTAGCATGGACCAGCATAAGACCAGCATAGGACCAGCATGGACCAGCATAAAACCAGCATAGGTCCAGCATAAACCAGCATACCAGCTCCAAAACCTACCTTAACCAGCATATGCTGTTTTTTTCAGCAGGGAAGCGGGTTATAACTGGTGTGTTTTATGTCATAGATCAAAACGTGAAAATATTTACTACCTTGACGGCCTGGCTCTCACCAGAGAACACCCTGTCCATTCAACAGTTTGCTGTGTCGTTCAGAGTAGGAACCTCTCCCCCTCTCTGTTTCAGAGGATGCTGGGGCTGATGACTTCAGCAGGGCCTGCTGCACATGCGCCCCCTGCAGTACTGGCTGAAACCACGAGTTCCAGCATGCACTTGGCACTCAGGTCTGCTTCTTGTAAAGGTGGACTACGGCTGCATGAAAGCCCTGGCCTCTTGGAAGGACCCCGGCTGGTATCAGACTGGTATGGAAATGGGGTTAGTCTCAAGGAGGAAGGTGGTCACGACAGATGCCTCCAGCTGGTGTTGGGGAGCTCTGTGCAAGGGCAGACCGGCCTCTGACTCTTGGTCAAGCATAGAGCAGCAGCTTCATTTCAACTGCCTAGAAATGATGGCGATTTTTTGGGCCCTCAAAACCTTCCTTCCGGACCTGACATTAGTCCGATGGGACAACATGGTAGTAGTGAACCACCAGGGTGGTCTCAGGTCGAGGCCTCTGCATGAGCTGTCCAGACTCCTCCTCTTATGGGCACATTGCAGCCTGCGCTGTCTGAGAGCAGCCCATGCGCGAGGCAGATTGAAACAAGGGGGACAATGTGCTCCCAGGAGAATGGACGCTACATCTCAAAACAGTTCAAATGACTACAACCTGTATAAATTCCTCCACGAAACAGAGAGCAGTGAGAACAAGTCAACGTGGAAAATCACAAGTATCCAAAGGAAAAAGATGTCAAAAAGCATGCTGAAAAATACCTTTGCCATAATCTGTGCACAGGTGGCTGTCTGCGCTCTGGTGTGGGCGCAGTGCCCCTCTCGCTGCAGCTGTCCGGCTGAATATCCGCCGTGCGCTCCCGGTGTGAGCATTATTCTGGATGACTGCGCCTGTTGTGTGGCGTGCGCCAGGCAGCAGGGTGAACTCTGCTCTCAAGCCAATCCCTGCGAAAGGGTCTCAGCTCATGAAGGAGACGCATGCCTATTAGGTGGCACTTTCTATCAAAATGGAGAGGTATTCTTTCCGAGCTGCAAATATCAGTGTATCTGTAAGGATGGTCAGATTGGATGTGTGCCACGCTGTAAACTAGATGTGATGCTTCCAGGGCCTGATTGCCCCTTTCCACGGAGGATCCAAGTTCCAGGAGAATGTTGTGAGAAATGGGTGTGTGATTCTCATGCTGAGATCAGTGTACTTGGTGGCTTTGCAATGGCTGCTTACAGGCAGGAAGAGACAGTTGGCATTGACCAGTGGGACTCCAGTGTAAACTGTATTGAGCAGACCACGGAATGGAGTGCCTGCTCAAAAACCTGTGGTATGGGAATGTCCACCAGAGTAACTAATAAGAACCAGCACTGTGAGATGATCAAGCAGAGCAGACTTTGTATGATCAGACCCTGTGAAAGCCTGAACAAGCAGAGAACCACAACAAGGGAAGACAGGTGTCTAAGAACAAGAAGAAACACTGAAACCTACTTCACCTTCAAGAATTGCACAAGCGTCCAATCCTACAAGCCCCGTTTTTGTGGGCTGTGCAGAGATGGCCGGTGCTGCACCCCTCACAGCACTAAGACAGCTCAGGTGGAGTTCCAGTGTCTGAAGGCAAGATCATCAGGAAACCAATGATGTTTATTAATACCTGTGTTTGTCATCATCACTGCCCACGTGACAACAACATCAACCAGCTTTCTGCCAGCACCGGTTACAGTGGACTTCAGCTCTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_12137876_12146233.mRNA True 3262 mRNA 0.46 6 12137774 12147884

Neighbor

gene id symbol gene type direction distance location
CI01000016_12116368_12123187 NA coding downstream 14476 12116302 ~ 12123298 (-)
CI01000016_11938043_11946368 NA coding downstream 191213 11937447 ~ 11946561 (-)
CI01000016_11908468_11923802 PRPF3 coding downstream 212009 11907727 ~ 11925765 (-)
CI01000016_11876020_11896223 ICE1 coding downstream 241551 11875492 ~ 11896223 (-)
CI01000016_11866962_11874982 PAPD7 coding downstream 262792 11865984 ~ 11874982 (-)
G100712 NA non-coding downstream 137747 11999700 ~ 12000027 (-)
G100701 NA non-coding downstream 155467 11982076 ~ 11982307 (-)
G100679 NA non-coding downstream 189946 11947221 ~ 11947828 (-)
G100670 NA non-coding downstream 236429 11901106 ~ 11901345 (-)
G100669 NA non-coding downstream 236913 11900642 ~ 11900861 (-)
G100722 NA non-coding upstream 12871 12160755 ~ 12161232 (-)
G100190 NA other downstream 2085385 10051168 ~ 10052389 (-)
G99178 NA other downstream 2322819 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 2625346 9509622 ~ 9512428 (-)
G98691 NA other downstream 2880163 9256102 ~ 9257611 (-)
G98679 NA other downstream 2897845 9234996 ~ 9239929 (-)

Expression


Co-expression Network