G93801


Basic Information

Item Value
gene id G93801
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 62817 ~ 150965 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU106730
TTTAACATCAACATTGTTTTGAAAAGTAGTGTTAATAGTCTGGGATGTTTGCTTTGAAAATGTATCATATTTACTACACATTTTTGTTATGGTCTATTTCATATTGTGATTATATGGTTGTCAACCACATTAGATACTCTGTGAGAGACATGTCTTAGGTCTAAACCATTCAAATAATAATTTTGCTGGTGTCACTGTTATTATGCGTTTGAAAAGCATTTCATATGCATTATGCACTGATGTTAGCGACTATATATTTGATTCAGGCTGGTTTGTTTGGAATCAAGTCAACTCTCTAATGTGATGCAAACAGTTTCCATCATCTCAAGTAACATGAAAAACTTGGCTTTGTTTGTCTCAGACACACTTGGCTAGAGCCAGTGTCTTTTAATGCATAGTGTGGTGGTGAGGAGGGAGAGCTTAATGATATTATTTTTGAGTGTATCAGCACAAAGCGGAGAACTCTGTGAATGAGACGTGTTATTGCTTGAACTAAGCGGCAACAGTGCTTGAGCAGAATGTGAAGGGAGGAATGGTGTGGGCCTTTTTCCTTTTTTTTAATTTACCACAATGTTACAATTGTTTGAGTATATCATAAGCAATACCTTTTGTAAAGAGAGACTGTTTGTTTTTCTGATACACAGGAAAAAATGTTTGCTTTTAGCCCACTAATTTGGAGTTACACTGCAGCCTGCATTTAAGAATCTTTTTACAAAGAAAAATCAACTTCAGTCTTTCTTAAATGGACTAGATAGACTAAATTACTCATTGTCTCTGTATGGCACTTTATGCAGTGCATTATGTTAGACCATTTTTCAGTTTCATTTTCATTCTGAATACTTGTTTGCAATTTGGAAGTGACTTTTTGGCAACAGTGACAATGTGTTGCTAGCTGATGTGATGTGAAAATGTATAACATTTAGAGTTCACCCAAAAATTGACAGTTTATTTACTCTCCTATGTCATTCCTGACTTATATGCTGTTATTTTTCCCCCTGTGGACTAGAAAAGAATTTATGTAAGTCTTTATATGATTGTTTTCCATTAAAAAAAAAAAAAAAAAAAAAACGCATAATGACCAAGATTGTGAACAAGTCAGTTACAAATCATATACTAGTAGGTTCATATTTTGAATAAGTAATTACTTCATTACCATTAAAAAAGTATGTTGTATGTCGTATGAATGTAATACGGATGTACAACATTTGACCTACCAGCGTCAGTTGTGTCGCCTCACTACCATTCACAAATCCTCCCCAGTCGTGGCTTCATGGTATAGTAAATTGTCCATTGGATGCGCATTTCATAATCTCGATGGAAGTAGTAGGTCATCCAAGTACTTTTTGCCTTCTGTGAAGTCAGACATGCAATTCTTTTCACATACTGTTTTTTTTTCCCTAGGGAAGTATGCATATTTTGATGCTCTGTGGCAACCAGTCTGATTCATGAATGAATCTTTCAGTCTGATTTGCGAACCTTATTAACTGATTTGTTGAAAAGAACTGATTCAAAATTGACTCCCCACATTTCAATATGCCTACTTCCCCTCTATATAGTATGCATGCTTTTTGCATTCTATATAGTATGCAAAAAATAGTATGTCAAGTGAGCAGTATGTTTGAATACACAGTATTCATAAAACGGCAAAAAATACCTGGATAATGTTCCACTTCCACAATAAAAATGACATAAACATGAGTGAATAATGAAAGAATATTCATTTTTTGGGTGAACTATCCCTCATAATTCTCATAGATGGCCTTATTATGTTGAATTTAACTTTATTTCTAAAGAAACAGAAGTCTAATTGTGTATCTTCCTTGTAATGGTTTCATTAGAAAAGAGCATGGCAAGGTCAAAAAAACATTTGTAACTTTCGTCGTCAAACTCTCTTCAAATCCACAGAGGTTGCCAAGGTTAACGGCCGTGTGTCGCCAGTAAGTGTGCGAGAATCTTTAATGACCATTGCTTACCTCGTTAGCCAGGACACCGCAGCACCTGTGGTGCGCTATAACCGTCAGACTAATGAGCTGTTGGCTGAATTTCATCTTGAAGTTTTCTGTGGCTTAACTGCTCCATTTACATTTCTTTCACATGCAAAATGGAGGACATGAAAGATTTGTCTCCGTAAAACAATGGCATTCTGAGGCATTGAAATTCACACTGTGAAGAAAAATAATAACATTCTCTGCTGATGTTAATGTGCTTTGTTTCATGCCAGCATGCCACACAGGCCCCATCAGCGGCGGATGGCATGAAGTGTAGATCTGAAGGATCACAGTGCGTGCCCAGTGCCTTGTCCTTATCAGACCTCACTGCATCTCTTTTCTCCTTTTCACCTCATCCTTGAACATATTCACAAACACATACAGACCGTTTTGGACATCAAGTTCGCTGCTTGCTACTCCCCTGCACACATTGTTTTAGCAAGTATTTTTTTTTAAACTTAAAAGTTGTAACTCTACCTAAGGGGTGCTGCAGTAGATACTTGGCATATTTAAAATGTTATTTGAATGCGGAGTTAAATTCCTCGAAAGAACTAGCCAACAAAATCTATTCTGATTTTGACTCTATTTAAGTATTAGCAGGTTCATCATTCACAAAGTTCTTTCAGTTCTTTTGTTATACATTCTGGCTCATTTTGTAATGCTTTAAAGGGATTGTTCCAAAAATGAAAATTGTCACCCTTATGTTCTTCCAAACCCATAAGACTTTTTCATCTTTGGAACACAAATGAAAATATTTTTAATAAAATCAGAGAGATTTCTGTCCCTCCTTTGAAAGTCTTTATATATATATATAACATTTATATAGAGATCATAAACGCAATCCATATGAATTAAGTTGTTTAATACAAGTCTTCTGAAGAGACACGATCGCTTAATATGATAAACAGATTTAATTTAAGCTTTTATTCACATATAAACATTGATCAGTGAACAGTGAAATGGAAGTTCAACTGTACTGGCTTGACGCATGAGAACAAACCTCATTGGTTCTCGCGGAAGCTCAAACGTGCTGTATCTCTTTATGAACCTTTTGAAGCATCAGATTTTTGGGTGAATAGACTTTCAATAGAGGGACAGAAATCTCTCAGATTTCATTAAAAATATCTTTATTTGTGTTTTAAAGATAAACGAAAGTCTTATGGGTTTGGAACAACATGAGTGTGAGTAAATGACAGAATTTTACATTTTGGGGAAACTCTTTAAGCCAGAAGTTTTCAAACTTTTTGATACTCTCATGACAACTCTCTGAGTGTTTGGCATGGTAAGGGATATGACAATGTTGATATGTTTGGTCTAGATCTAGATTTGGTCAGATCGGAATAGATCTGCTACGCTGCTGCTGTGAGCAAGTAAGACATGCTGCTGCTGTACAATATAACATACATGAATTACCCATAGCAGATCTATGCAGATCGAGCTGGGGAAGGTGGAACTGCTACAGTAAATGCTGACCAAGTATTTGAAGGTTGAGCAGCGAGCTCACTGGCTACTGATAGAGCAGGAGCCAATCAGCTGTGCCCTATAGAGAATGATGATTGCAAGCAGATTGAGTTAAGGACCTATCAGCCTGCGCCATCTAGAGATTCATGACAGAACATTGTATGTAGATTATTTTATTTGTTTAAAAATACATTTTGTAAAATGACTTTATTTCTCTCAATTTTTTGAGAGATGTTAGGATTGTATTGATAAAGAGATTCATTTAGGTGTTTCTTCAGGATGTAATGTTTTAAATTTTATAGAAGTGTATTAATATTAAAAAGTGGGAGTTTATGATGGAATTTGGATAAACTGAAACAATACAGTTCCACAGTAGCCCGCCAAATATGGACTCTGTTTGGTTAATATACAGACTGCTGGGTGGTTTGTAACAGTTTATATTTTGTTTAGAAATGTGCCAAATATCTGAAATCAAGGAAAGTGTACTTTAGGGACACCATATCAGCATCGCAGTAGGAAAACAGAATCATCATCCTGTCAGGTATGTTATTGCAGAAAGATAAGAACTTAGCCGTTATCTTAAACAACCCAAACTGATTAAATGCCCAGTCATCACGCTACACCGCTCCCTACTGAGGGTCCTCCAGCGGCACAGGCAGCCTGCGAATAGAGGCGAAATGAATGAGAAGGTCTGGAAAGGGTATCAGCTGCTATAATTCCACAGTGAATGAGCCTGATGTCACTCGTCGCCCATCAGTCAGGGACTCACTTGGAGTTTGCCATGCCACGGGGAAAAATGACATCAGAACGCTCACTCCCTGCTCTTTGATTTACTGCTTGATGAGTAGCAAATCTCTGGGAGATGTACTGATCACCAGACTCTCATTTTTATCCCCCACCTTTCAGACCCACCTGTGCTGAGCATTTTGCTCTTGTTTTCAGGGGCTGAAAATGACAACTTTCTGTCTTTCGCTTTCAGAAGATTGTGATGCCTCTGGTGTAGTAATGTAATAGCAAGAGAACAGGAGGTGATTGTCACTATCATCTCTAGTCTGGCACCTCCCTTATGTTGGCATCCTTTTTATGAAAGCATTCCTGCTGTTGTTACTGGAGAAGCACATACAGTTGGGCCCAAAAGTCTGAGTACAAAATGAAAATGATTTTNNNNNNNNNTTTATCAGTTAGATATTTTACTGGGGTTCGTGTCCCAGTAAAAAGGGTCTAGCGACGCCCCTGTGCTAAATAGTTTGATGTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106730 True 4706 lncRNA 0.37 2 62817 150965

Neighbor

gene id symbol gene type direction distance location
CI01000016_00012244_00028573 NA coding downstream 34244 11615 ~ 28573 (-)
CI01000016_00002941_00010117 RCC1 coding downstream 52700 2493 ~ 10117 (-)
CI01000016_00153934_00154312 NA coding upstream 2943 153908 ~ 155622 (-)
CI01000016_00166492_00172759 SERINC2L coding upstream 15120 166085 ~ 172759 (-)
CI01000016_00251025_00251471 GBP coding upstream 99253 250218 ~ 251486 (-)
CI01000016_00448107_00452861 CCNE2 coding upstream 296893 447858 ~ 452861 (-)
CI01000016_00456765_00460615 TP53INP1 coding upstream 303863 454828 ~ 461209 (-)
G93805 NA non-coding downstream 3222 59358 ~ 59595 (-)
G93829 NA non-coding upstream 37639 188604 ~ 189338 (-)
G93835 NA non-coding upstream 48193 199158 ~ 202946 (-)
G93873 NA non-coding upstream 130029 280994 ~ 281211 (-)
G93934 NA non-coding upstream 249528 400493 ~ 401772 (-)
G93954 NA non-coding upstream 358106 509071 ~ 509303 (-)
G94786 NA other upstream 2119871 2270836 ~ 2276275 (-)
G95070 NA other upstream 2834295 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 3484642 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 3714796 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 4761743 4918975 ~ 4922518 (-)

Expression


Co-expression Network