G93359


Basic Information

Item Value
gene id G93359
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 759186 ~ 773268 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU106229
GTAGCGATCGTCTGCAAGCTATCAATGGTCAGGTAAACAAATGTATTTAAACACACACAATACACCATCGCATTATCCCTGGATAACTTTTGAATCGCTATAATGAATATAGTGTATAGTGAATGATCCATAATGAATTTATGAATTCACTACGTTTGTGTTGTTTACATTATATGCACTTAGGCGCCTATTGCCAAAAAAACAGACATTTGAAGCAGTTTTACTCACCACCTGCGGTTCCGACTCATGACCGGGATCATTACCGCTGTGACCGCTCCATCTTTCAGTTTCAAACAATCTGTAAATCCAGCGTAGAACTGGGCCTTGTTTATGAAACCATAAGCGCCGATCCTGAAGGCTCGAGCAGCCACGGAAAAACACGAGATATTCTCCATTCATTTTAACCAATAAAAAAAGTGATTGCAACTATCAGTTTCTATGGTTATTTTAATAACAAATATCAAGAGCGCATCAATGTAATGCGTGAGCACAAAACTCTCAGCTCCACTTAATGCTGGGTTCTTTGGGAAGCAAGGTTATCTTTCCCTCACAACCTTTATGACGTCACACAGCCTCATACTCGAAAAAAAGACTGCAAAGTTTATGAGGATTTGGAAGAGTATTTTTGGCACAGAAATACTCCGTCATTCGTACAACTCGTGTTTTGAAACTTTGGCCATGTTTAGCATGAGAATCCAACTCTTTAACAGTGTAAATAAGTCAGAATACATGAAATAGCATTATACCCCCNNNNNNNNNNNNNNNNNNACGAGAATACTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106229 True 783 lncRNA 0.38 2 759186 773268

Neighbor

gene id symbol gene type direction distance location
CI01000016_00569502_00581271 NA coding upstream 177687 569502 ~ 581499 (+)
CI01000016_00540871_00541608 PLEKHF2.L, PLEKHF2 coding upstream 217463 540632 ~ 541723 (+)
CI01000016_00496095_00506965 NDUFAF6 coding upstream 252153 496095 ~ 507033 (+)
CI01000016_00318676_00446341 NA coding upstream 312845 318676 ~ 446341 (+)
CI01000016_00294886_00298452 NA coding upstream 460025 294886 ~ 299161 (+)
CI01000016_00885996_00887374 NA coding downstream 112728 885996 ~ 887478 (+)
CI01000016_00952494_00954683 NA coding downstream 179226 952494 ~ 954953 (+)
CI01000016_00959079_00960728 NA coding downstream 185385 958653 ~ 961060 (+)
CI01000016_00972599_01002933 NA coding downstream 198844 972112 ~ 1003172 (+)
CI01000016_01033465_01037665 NA coding downstream 260197 1033465 ~ 1038446 (+)
G93358 NA non-coding upstream 5347 753601 ~ 753839 (+)
G93357 NA non-coding upstream 6429 752523 ~ 752757 (+)
G93355 NA non-coding upstream 9628 749343 ~ 749558 (+)
G93349 NA non-coding upstream 29456 729504 ~ 729730 (+)
G93348 NA non-coding upstream 32457 726529 ~ 726729 (+)
G93364 NA non-coding downstream 526 773794 ~ 774244 (+)
G93367 NA non-coding downstream 5507 778775 ~ 779171 (+)
G93423 NA non-coding downstream 66898 840166 ~ 840495 (+)
G93410 NA non-coding downstream 88836 862104 ~ 868937 (+)
G93409 NA non-coding downstream 154572 927840 ~ 932801 (+)
G93406 NA other downstream 132132 905400 ~ 927532 (+)
G95439 NA other downstream 3088907 3862175 ~ 3862305 (+)
G95648 NA other downstream 3499368 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 4061290 4829592 ~ 4837457 (+)
G95792 NA other downstream 4446612 5219880 ~ 5225941 (+)

Expression


Co-expression Network