G94213



Basic Information


Item Value
gene id G94213
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 976880 ~ 978159 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU107194
TTTAAAGTGAGCACAAACTTCTTGGATGATGGGATCTGGCAGAGAGCGATGATAGATGCAGGAGGAGGAGTTTCTGCTTTGTGGAGTCCAGACAACTATTCTGAGTAATCCTGCCCTCCGGCGATATGACTCTACAGTCACCTCTGAAAAATGAAACATCAAACAAGGGATCAAGTCTTCAAAACAGAGATGTCTCAATGAAATAGCCATTCCGTGATTGAGTAAAACTCTAATTGGAAATGATGCCAGAGAGAAAAGATGAGATGAGAGAAAAGGGCAGAAGAAACAATAAAATGAGAGAAGAGATAAGAAAATAAATAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAATGAGAGTTGAGAGGAATTCAGATCAGAATGGAAGAAACAAAAGGAAGAGAGAAAAAGATATCAGAAAATATCAGAGGAGACAAGCATGGCCGCAATAAGGGTTTGAAAATTAGCGAAGTCTGGGGTGTGATGTTAAGAATTGTGCTATAATAACACCTACAAATGCACTAATGTATTTCTTCAGAACCTTTTTTGCCATTCTACACTGGGTACACTCTCTCTGTTCTGTCTGTTTTGGGGGGATGGACATTCTTAAATTAGACCTATTGCCTTATTGCCTATTATCTTAGACCTATTGAGTTTGTTAACACGTTTTACTATAGACTAGGTAATTTTATTGTTTATTATTCATGTAACAATACTTTATCAGTGTAAAAGTTTTTATTTATAAGCATTGATGTATGGATGATAAGTAATAAGAACTTTGTCTTAGCATGACTTTGTGAAAGGTTAACTACTAAAATGAATGGAAAACGCAGCGCTCATCACGGTCACTTTGTACCCAGCTGTCCAATCACAGTGGAGTAGGGGCAGGACAAATACCACACCAACCAACCGCCACATTCTGCTTGTACAACATCCACAGATGACAACAACAAGCATAATAATGGAACAAAATCATTTAAAGACCCC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU107194 True 1009 lncRNA 0.38 2 976880 978159
Loading

Neighbor


gene id symbol gene type direction distance location
CI01000016_00843272_00857193 NA coding downstream 119584 843150 ~ 857296 (-)
CI01000016_00775184_00778097 HINT3 coding downstream 198783 774658 ~ 778097 (-)
CI01000016_00754785_00770356 NA coding downstream 206524 754683 ~ 770356 (-)
CI01000016_00679328_00729780 NA coding downstream 246914 678792 ~ 729966 (-)
CI01000016_00601605_00607255 RSPO3 coding downstream 369625 600622 ~ 607255 (-)
CI01000016_01088942_01089316 NA coding upstream 110393 1088552 ~ 1089339 (-)
CI01000016_01134396_01182271 OSBPL10 coding upstream 155655 1133814 ~ 1182271 (-)
CI01000016_01195747_01197970 KIAA1143 coding upstream 217558 1195717 ~ 1199062 (-)
CI01000016_01199558_01199730 TMEM42 coding upstream 221386 1199545 ~ 1199730 (-)
CI01000016_01202843_01213613 ZDHHC3B, ZDHHC3, ZDHHC3A, MGC82349 coding upstream 223099 1201258 ~ 1213613 (-)
G94137 NA non-coding downstream 113918 858768 ~ 862962 (-)
G94106 NA non-coding downstream 179161 797484 ~ 797719 (-)
G94073 NA non-coding downstream 230905 745672 ~ 745975 (-)
G94098 NA non-coding upstream 5408 983567 ~ 984870 (-)
G94084 NA non-coding upstream 22265 1000424 ~ 1009153 (-)
G94247 NA non-coding upstream 65419 1043578 ~ 1043797 (-)
G94238 NA non-coding upstream 78196 1056355 ~ 1057041 (-)
G94253 NA non-coding upstream 81129 1059288 ~ 1060054 (-)
G94786 NA other upstream 1292677 2270836 ~ 2276275 (-)
G95070 NA other upstream 2007101 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 2657448 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 2887602 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 3934549 4918975 ~ 4922518 (-)

Expression


G94213 Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
End of interactive chart.

G94213 Expression in each Bioproject

Bar chart with 34 bars.
G94213 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G115149 NA unknown NC_056714.1 CM032083.1 21801475 ~ 21803804 (-)