G94394



Basic Information


Item Value
gene id G94394
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 1452175 ~ 1452402 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU107394
CATTTTTCCTGCTTCTAACACATCAACTTTGAGGACAAAATGTTCACTTGCTGCCTAATATATATCACCCACTAACAGGTGCCATGATGAAGAGATAATCAGTGTTATTCACTTCACCTGTCAGTGGTCATAATGTTATGCCTGATCTGTGTATATATTAGACATGCTGATATACAGTTAAACAATATATTATAACAATGAACGCACAGAATTGTTATCATGCAGGGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU107394 True 228 lncRNA 0.36 1 1452175 1452402

Neighbor


gene id symbol gene type direction distance location
CI01000016_01396291_01399075 TRHRA coding downstream 51221 1394715 ~ 1400954 (-)
CI01000016_01341525_01342959 ENY2, ENY2.L coding downstream 108617 1341347 ~ 1343558 (-)
CI01000016_01224759_01234682 NA coding downstream 217493 1224136 ~ 1234682 (-)
CI01000016_01202843_01213613 ZDHHC3B, ZDHHC3, ZDHHC3A, MGC82349 coding downstream 238562 1201258 ~ 1213613 (-)
CI01000016_01199558_01199730 TMEM42 coding downstream 252445 1199545 ~ 1199730 (-)
CI01000016_01476991_01494147 NA coding upstream 24435 1476837 ~ 1494994 (-)
CI01000016_01577710_01581289 NA coding upstream 124004 1576406 ~ 1581679 (-)
CI01000016_01653014_01654553 NA coding upstream 199985 1652387 ~ 1654559 (-)
CI01000016_01659416_01671969 NA coding upstream 206572 1658974 ~ 1671969 (-)
CI01000016_01689633_01693021 NA coding upstream 237093 1689495 ~ 1693672 (-)
G94351 NA non-coding downstream 116511 1335082 ~ 1335664 (-)
G94316 NA non-coding downstream 188426 1263507 ~ 1263749 (-)
G94310 NA non-coding downstream 206578 1245346 ~ 1245597 (-)
G94256 NA non-coding downstream 320233 1125042 ~ 1131942 (-)
G94253 NA non-coding downstream 392121 1059288 ~ 1060054 (-)
G94364 NA non-coding upstream 110687 1563089 ~ 1563911 (-)
G94433 NA non-coding upstream 112918 1565320 ~ 1565651 (-)
G94434 NA non-coding upstream 115653 1568055 ~ 1568282 (-)
G94449 NA non-coding upstream 170630 1623032 ~ 1624002 (-)
G94510 NA non-coding upstream 280677 1733079 ~ 1737573 (-)
G94786 NA other upstream 818434 2270836 ~ 2276275 (-)
G95070 NA other upstream 1532858 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 2183205 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 2413359 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 3460306 4918975 ~ 4922518 (-)

Expression



Co-expression Network