G93624


Basic Information

Item Value
gene id G93624
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 1496393 ~ 1554026 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU106512
CACCAAAAAAAAAAAAAACTACAAATGGCTTTATATATAAAAATGTCTGAGAAGGCTGTATTTGAAATCTGATTTTATGACTTGCACATATGATGGCTTTTGTATTTGTCTTTTGCCCTCAAAGTCTTAAATTCCCAGTTTTAAATTCATTGGTCTTTATTTGAGTAGAGAGTCTGTGTGCACTTGGTGATAATTTTAGTTTTTAGTTGAATGTCTAAAATCTTGTCATCTGTAAATCAGTGTGATCTCTTACAATCCATTGTAATCCATTTTGCAGTTGATTTGTGGGGCCAAGCACATAGGAGGCATTGTTGTATTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106512 True 321 lncRNA 0.32 2 1496393 1554026

Neighbor

gene id symbol gene type direction distance location
CI01000016_01476236_01476607 NA coding upstream 19631 1476236 ~ 1476762 (+)
CI01000016_01408124_01408966 TMEM74 coding upstream 87228 1406636 ~ 1409165 (+)
CI01000016_01277792_01304615 NA coding upstream 191631 1276928 ~ 1304762 (+)
CI01000016_01253760_01273553 NA coding upstream 222440 1253406 ~ 1273953 (+)
CI01000016_01238151_01242924 GDF6, GDF6A coding upstream 253433 1237991 ~ 1242960 (+)
CI01000016_01563821_01567070 NA coding downstream 8372 1562398 ~ 1567529 (+)
CI01000016_01588035_01601276 RSPO2 coding downstream 33044 1587070 ~ 1601909 (+)
CI01000016_01656995_01657299 NA coding downstream 102969 1656995 ~ 1658390 (+)
CI01000016_01989129_01990437 NA coding downstream 434998 1989024 ~ 1990995 (+)
CI01000016_02000795_02079453 ADGRB1, ADGRB1A coding downstream 446183 2000209 ~ 2080896 (+)
G93565 NA non-coding upstream 27038 1462117 ~ 1469355 (+)
G93567 NA non-coding upstream 34415 1461600 ~ 1461978 (+)
G93547 NA non-coding upstream 46799 1394698 ~ 1449594 (+)
G93598 NA non-coding upstream 46956 1421620 ~ 1449437 (+)
G93483 NA non-coding upstream 153595 1340452 ~ 1342798 (+)
G93711 NA non-coding downstream 359771 1913797 ~ 1942317 (+)
G93780 NA non-coding downstream 414512 1968538 ~ 1978432 (+)
G93777 NA non-coding downstream 485563 2039589 ~ 2045283 (+)
G93794 NA non-coding downstream 539926 2093952 ~ 2094182 (+)
G93779 NA non-coding downstream 550880 2104906 ~ 2105133 (+)
G93406 NA other upstream 568861 905400 ~ 927532 (+)
G95439 NA other downstream 2308149 3862175 ~ 3862305 (+)
G95648 NA other downstream 2718610 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 3280532 4829592 ~ 4837457 (+)
G95792 NA other downstream 3665854 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 3851843 5405791 ~ 5407963 (+)

Expression


Co-expression Network