Gene
RNA
| Item | Value |
|---|---|
| gene id | G93777 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 2039589 ~ 2045283 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU106693 | True | 1748 | lncRNA | 0.40 | 2 | 2039589 | 2045283 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000016_01989129_01990437 | NA | coding | upstream | 48594 | 1989024 ~ 1990995 (+) |
| CI01000016_01656995_01657299 | NA | coding | upstream | 381199 | 1656995 ~ 1658390 (+) |
| CI01000016_01588035_01601276 | RSPO2 | coding | upstream | 437680 | 1587070 ~ 1601909 (+) |
| CI01000016_01563821_01567070 | NA | coding | upstream | 472060 | 1562398 ~ 1567529 (+) |
| CI01000016_01509959_01560806 | EIF3E.L, EIF3EB, EIF3E, EIF3E.S, EIF3EA | coding | upstream | 478467 | 1509959 ~ 1561122 (+) |
| CI01000016_02220464_02221013 | NA | coding | downstream | 175181 | 2220464 ~ 2221030 (+) |
| CI01000016_02235073_02261683 | CEP162 | coding | downstream | 189790 | 2235073 ~ 2262308 (+) |
| CI01000016_02337039_02343109 | POGZB | coding | downstream | 291756 | 2337039 ~ 2343109 (+) |
| CI01000016_02355737_02362570 | SELENBP1, SBP1 | coding | downstream | 310454 | 2355737 ~ 2363246 (+) |
| CI01000016_02367430_02368661 | PI4KB | coding | downstream | 322147 | 2367430 ~ 2368687 (+) |
| G93780 | NA | non-coding | upstream | 61157 | 1968538 ~ 1978432 (+) |
| G93711 | NA | non-coding | upstream | 97272 | 1913797 ~ 1942317 (+) |
| G93624 | NA | non-coding | upstream | 485563 | 1496393 ~ 1554026 (+) |
| G93565 | NA | non-coding | upstream | 570234 | 1462117 ~ 1469355 (+) |
| G93567 | NA | non-coding | upstream | 577611 | 1461600 ~ 1461978 (+) |
| G93794 | NA | non-coding | downstream | 48669 | 2093952 ~ 2094182 (+) |
| G93779 | NA | non-coding | downstream | 59623 | 2104906 ~ 2105133 (+) |
| G94696 | NA | non-coding | downstream | 153725 | 2199008 ~ 2271134 (+) |
| G94726 | NA | non-coding | downstream | 285243 | 2330526 ~ 2333592 (+) |
| G93406 | NA | other | upstream | 1112057 | 905400 ~ 927532 (+) |
| G95439 | NA | other | downstream | 1816892 | 3862175 ~ 3862305 (+) |
| G95648 | NA | other | downstream | 2227353 | 4272636 ~ 4273905 (+) |
| CI01000016_04829592_04837305 | NA | other | downstream | 2789275 | 4829592 ~ 4837457 (+) |
| G95792 | NA | other | downstream | 3174597 | 5219880 ~ 5225941 (+) |
| CI01000016_05405791_05407797 | AICDA | other | downstream | 3360586 | 5405791 ~ 5407963 (+) |
