G95376


Basic Information

Item Value
gene id G95376
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3398182 ~ 3404860 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU108502
GTATTATCTCCCTTATTTTGTTAAAATTATTAACATTTTCACAGATTCTGCAAGTGGTTCACATACTTTTTCTTGCAACTGTATATTTAAGTTGAAAATACATTTTATTTAAACCTTCAAAATCCAAAATATATTACAAAATGTACCTCAAATATCCGCTTCAAATATTACAATGCTCACGATAACTATCGTTAACTCTACAATATGTAAATCCACTTCAGCTAATTACTCTTTGAAAGCGATGCCATAGAAAAATACAGAGCTACAAAAACGGAATGTCAAACAACAAAATTATGGCTGCGTGCTTGTTTCCTCTGACGCATAAGGTCTATAAGTAACTAAAACGTATCAAAAATGTGTATTAGCAAGGTATTTTGGCCATATTTTGAAATATAAAGATATTTTAAAGAACCTGAAAATATATATTTTGTCATATGAGTTAGTAGGACTGTGTATTTTTATTATGCTTGTTTCTGCCCTAGACGGAAGACTCCAATTATCAGTTACTGTGTGAGGAATTCATGCATCACAACTTGGTTGAAAAAAAAGGGGAAAAAGCAGAAAAAAATGTCCTGTTTCATGTTCCTCCAAGACCATTCTACATCACCTCTCCCCTTCAGAAGGAAGGCACAGAAACATCCATTAGTGAGATTGTTTTTCCTGCAACACCCGCAATACACGGAGTAACAAGTTGCTCCCAGACTGAAGACCCGTAGGGCCCTTGCTGCACACATCAACTCAGAAATTGGATTTCTTCCTTTTTCTTTTCACTATTTCTTGTTATTGGTATTGTTGTTCCCTTGTCTTTTTTCTTTTGTTCTCAGCGTTTTGCTTCAGTTTCAAGGAGACATTATGTCATTCATTTAGTAATGCTGTCGCACAAGTTGAAGATGTGATGCAGGTGTCCATTTTAAGCATTACATCAGCATCAAAACCCTATCATCTGGAGAGAAAGTAGGACCTTTCAGAATATATTAACCAAAGCTATTTTTAAATCACTTTTACAATCTATGTATTTGCAAAGACCTTGGAGCATGTTATTGAATTAAAATCAGCGACAAACCTGCAACAATGGGACTCAATAATTGTGATATGGGTTGAATGACGCATTATGAATATGTATCAAATTTAGCAGCAGGCCATTATGCAAAACAGAGGTCCTATAACACAAGCATCTCTCACACAGGTGGTTATTCCATATTGTGGGTGACCCAGCATGCCAGATCTCCAACAAGACTACTCTTTATAGGTTGCGTCTCACAAGGACCCTCTCATAATGATGAAGATTACGAAGATGAAGAAGAGTTCCAACGCGAAGGTTTTAATAAAAGAATAAACACAGGGTAATCCAAGACGAAGTAACAGGGGGTAGTAACAAGTTTCACGGCATCCCTCCACCACCCCATCACCTCACTCTTGGCTGGTTTTTATCTCAGTTAAGGAGAGGGAGTACTCTGGGTTCGCAAGCCCTCCCGCATTGCGCTGTTCCTGTCTGAACGGAACGTCGAAACATCCCACCGCTGTAATGCCAGATGATATGAAAAATGTTTCTTGGCTGGATAAAGCAAACCAGCTTCTTGCTATTAAAGTTCTGATGGATGAGGATTGCAAAGTAAAGACGATTGCGGTGACGTACAGAAGCACGCATGAGTTCGTTATATTGATGCGCAAATGAGCGCTCTCGACGCACTGATTGCCATTTGTATTTATGCACAGACACATTTCAGTACATTCATGTTGTTTTCACACACATTCAGGATAATGTTTGGATTTGTCCTATGTATGTTGCTGTGTACTTTAGTATATATGCAGGTCAAGGCAGTTGGTTTAGGTTTTTTTGGCA
>TU108500
GCAGTGATGCAGCAGCAGATGTCTCCCTGATTAAAGCTATATTCTTGTCATTTCATGCCAAAGAGGCCATCGTCTACGGAAGACTCCAATTATCAGTTACTGTGTGAGGAATTCATGCATCACAACTTGGTTGAAAAAAAAGGGGAAAAAGCAGAAAAAAATGTCCTGTTTCATGTTCCTCCAAGACCATTCTACATCACCTCTCCCCTTCAGAAGGAAGGCACAGAAACATCCATTAGTGAGATTGTTTTTCCTGCAACACCCGCAATACACGGAGTAACAAGTTGCTCCCAGACTGAAGACCCGTAGGGCCCTTGCTGCACACATCAACTCAGAAATTGGATTTCTTCCTTTTTCTTTTCACTATTTCTTGTTATTGGTATTGTTGTTCCCTTGTCTTTTTTCTTTTGTTCTCAGCGTTTTGCTTCAGTTTCAAGGAGACATTATGTCATTCATTTAGTAATGCTGTCGCACAAGTTGAAGATGTGATGCAGGTGTCCATTTTAAGCATTACATCAGCATCAAAACCCTATCATCTGGAGAGAAAGTAGGACCTTTCAGAATATATTAACCAAAGCTATTTTTAAATCACTTTTACAATCTATGTATTTGCAAAGACCTTGGAGCATGTTATTGAATTAAAATCAGCGACAAACCTGCAACAATGGGACTCAATAATTGTGATATGGGTTGAATGACGCATTATGAATATGTATCAAATTTAGCAGCAGGCCATTATGCAAAACAGAGGTCCTATAACACAAGCATCTCTCACACAGGTGGTTATTCCATATTGTGGGTGACCCAGCATGCCAGATCTCCAACAAGACTACTCTTTATAGGTTGCGTCTCACAAGGACCCTCTCATAATGGTATAATTTACCCATTAATGACACATGTTGTCCCTCGCCACTGACTGCGCACTGTCATTAATGAGGCCATTTGCATTTGGTGGCAGTCTGCCAGTCGAGGCTCTCCGCCATGTTTGCTGAATGAGTCCTTTCAAACCGCAGACTCTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108502 False 1843 lncRNA 0.38 2 3398182 3400957
TU108500 True 1021 lncRNA 0.41 2 3399530 3404860

Neighbor

gene id symbol gene type direction distance location
CI01000016_03322103_03326683 NA coding downstream 67420 3322003 ~ 3330762 (-)
CI01000016_03082653_03084658 NA coding downstream 313524 3082386 ~ 3084658 (-)
CI01000016_03072793_03080040 NA coding downstream 318142 3072728 ~ 3080040 (-)
CI01000016_03064633_03068201 NA coding downstream 329090 3064562 ~ 3069092 (-)
CI01000016_03062846_03063013 NA coding downstream 334910 3062846 ~ 3063272 (-)
CI01000016_03555967_03558776 C1H1ORF43, CUNH1ORF43 coding upstream 150440 3555300 ~ 3559186 (-)
CI01000016_03647744_03675574 NA coding upstream 242793 3647653 ~ 3675585 (-)
CI01000016_03719404_03722988 NA coding upstream 314307 3719167 ~ 3723058 (-)
CI01000016_03834829_03843163 ZNF687 coding upstream 429640 3834500 ~ 3843266 (-)
CI01000016_03881771_03883341 NA coding upstream 475633 3880493 ~ 3883466 (-)
G95315 NA non-coding downstream 72007 3325912 ~ 3326175 (-)
G95313 NA non-coding downstream 73500 3324367 ~ 3324682 (-)
G95210 NA non-coding downstream 291734 3105760 ~ 3106448 (-)
G95203 NA non-coding downstream 306431 3091365 ~ 3091751 (-)
G95380 NA non-coding upstream 1572 3406432 ~ 3406702 (-)
G95387 NA non-coding upstream 6379 3411239 ~ 3411521 (-)
G96569 NA non-coding upstream 31350 3436210 ~ 3437197 (-)
G96592 NA non-coding upstream 106443 3511303 ~ 3511652 (-)
G96597 NA non-coding upstream 123691 3528551 ~ 3528890 (-)
G95070 NA other downstream 412541 2985260 ~ 2985641 (-)
G94786 NA other downstream 1121907 2270836 ~ 2276275 (-)
CI01000016_03921124_03930996 NA other upstream 460901 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 1507848 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 1920659 5325519 ~ 5332874 (-)
CI01000016_05412782_05415867 NA other upstream 2007399 5412248 ~ 5415906 (-)

Expression


Co-expression Network