Gene
RNA
| Item | Value |
|---|---|
| gene id | G95659 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 4417888 ~ 4418614 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU108798 | True | 518 | lncRNA | 0.42 | 2 | 4417888 | 4418614 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000016_04400456_04412173 | ATP1A3A, ATP1A3B, ATP1A3 | coding | upstream | 4816 | 4400456 ~ 4413072 (+) |
| CI01000016_04365155_04367358 | NA | coding | upstream | 49941 | 4364285 ~ 4367947 (+) |
| CI01000016_04321053_04331396 | NA | coding | upstream | 85649 | 4321053 ~ 4332239 (+) |
| CI01000016_04246693_04261518 | VARS2, VARS | coding | upstream | 156259 | 4246693 ~ 4261629 (+) |
| CI01000016_04234275_04238405 | INO80E | coding | upstream | 179387 | 4234275 ~ 4238501 (+) |
| CI01000016_04428669_04441464 | DEDD1 | coding | downstream | 10055 | 4428669 ~ 4441464 (+) |
| CI01000016_04491680_04506535 | POU2F2A | coding | downstream | 72762 | 4491376 ~ 4506806 (+) |
| CI01000016_04507602_04509233 | NA | coding | downstream | 88321 | 4506935 ~ 4509233 (+) |
| CI01000016_04557546_04579200 | NA | coding | downstream | 138932 | 4557546 ~ 4579501 (+) |
| CI01000016_04590667_04633139 | CIC, CICB | coding | downstream | 172053 | 4590667 ~ 4634450 (+) |
| G95650 | NA | non-coding | upstream | 44668 | 4372986 ~ 4373220 (+) |
| G95649 | NA | non-coding | upstream | 46055 | 4371581 ~ 4371833 (+) |
| G95445 | NA | non-coding | upstream | 235947 | 4077383 ~ 4181941 (+) |
| G95626 | NA | non-coding | upstream | 416788 | 4000781 ~ 4001100 (+) |
| G95623 | NA | non-coding | upstream | 423807 | 3993806 ~ 3994081 (+) |
| G95673 | NA | non-coding | downstream | 98262 | 4516876 ~ 4517094 (+) |
| G95485 | NA | non-coding | downstream | 119066 | 4537680 ~ 4546072 (+) |
| G95489 | NA | non-coding | downstream | 128899 | 4547513 ~ 4554010 (+) |
| G95692 | NA | non-coding | downstream | 395567 | 4814181 ~ 4927792 (+) |
| G95648 | NA | other | upstream | 143983 | 4272636 ~ 4273905 (+) |
| G95439 | NA | other | upstream | 554031 | 3862175 ~ 3862305 (+) |
| G93406 | NA | other | upstream | 3490356 | 905400 ~ 927532 (+) |
| CI01000016_04829592_04837305 | NA | other | downstream | 415944 | 4829592 ~ 4837457 (+) |
| G95792 | NA | other | downstream | 801266 | 5219880 ~ 5225941 (+) |
| CI01000016_05405791_05407797 | AICDA | other | downstream | 987255 | 5405791 ~ 5407963 (+) |
| G96389 | NA | other | downstream | 2742027 | 7160641 ~ 7161290 (+) |
| CI01000016_07784248_07784757 | TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S | other | downstream | 3365451 | 7783987 ~ 7784996 (+) |
