G95673


Basic Information

Item Value
gene id G95673
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4516876 ~ 4517094 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU108816
TTCAATGACAAGGTCTTTACTAGGAAACAGGCAGGAGAATACACTTGTGTCAGGACCACTATCGTCAAGTATGATTGATAATGCATAGAGTTTGTTTTGGCGGTATGATTCTGTTCTGGGCAAGAACTCCCTGCGCATCCATGCAGCCTAGCATGGATAAGAGCAGGGAGAGCAGCCATAACCCCCCTTAGGGTAAACAGAACAGAACCAACATATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108816 True 219 lncRNA 0.46 1 4516876 4517094

Neighbor

gene id symbol gene type direction distance location
CI01000016_04507602_04509233 NA coding upstream 7643 4506935 ~ 4509233 (+)
CI01000016_04491680_04506535 POU2F2A coding upstream 10070 4491376 ~ 4506806 (+)
CI01000016_04428669_04441464 DEDD1 coding upstream 75412 4428669 ~ 4441464 (+)
CI01000016_04400456_04412173 ATP1A3A, ATP1A3B, ATP1A3 coding upstream 103804 4400456 ~ 4413072 (+)
CI01000016_04365155_04367358 NA coding upstream 148929 4364285 ~ 4367947 (+)
CI01000016_04557546_04579200 NA coding downstream 40452 4557546 ~ 4579501 (+)
CI01000016_04590667_04633139 CIC, CICB coding downstream 73573 4590667 ~ 4634450 (+)
CI01000016_04649660_04661928 GSK3A, GSK3A.S, GSK3AA, GSK3AB coding downstream 132484 4649578 ~ 4663555 (+)
CI01000016_04666701_04684512 NA coding downstream 148828 4665922 ~ 4684837 (+)
CI01000016_04743905_04763216 GRIK5 coding downstream 226727 4743821 ~ 4763507 (+)
G95659 NA non-coding upstream 98262 4417888 ~ 4418614 (+)
G95650 NA non-coding upstream 143656 4372986 ~ 4373220 (+)
G95649 NA non-coding upstream 145043 4371581 ~ 4371833 (+)
G95445 NA non-coding upstream 334935 4077383 ~ 4181941 (+)
G95485 NA non-coding downstream 20586 4537680 ~ 4546072 (+)
G95489 NA non-coding downstream 30419 4547513 ~ 4554010 (+)
G95692 NA non-coding downstream 297087 4814181 ~ 4927792 (+)
G95703 NA non-coding downstream 334947 4852041 ~ 4852964 (+)
CI01000016_04932388_04935392 NA non-coding downstream 416609 4931929 ~ 4935904 (+)
G95648 NA other upstream 242971 4272636 ~ 4273905 (+)
G95439 NA other upstream 653019 3862175 ~ 3862305 (+)
G93406 NA other upstream 3589344 905400 ~ 927532 (+)
CI01000016_04829592_04837305 NA other downstream 317464 4829592 ~ 4837457 (+)
G95792 NA other downstream 702786 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 888775 5405791 ~ 5407963 (+)
G96389 NA other downstream 2643547 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 3266971 7783987 ~ 7784996 (+)

Expression


Co-expression Network