G96921


Basic Information

Item Value
gene id G96921
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4628038 ~ 4629281 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU110280
GTGGGAAACACTGCATTGTTCAGCTAATTTTCATAAAATCCAATAATTTCAATAGAAATCCACATGATTCGGATTTTCTCGAGAGGGCGAAAGATTTCCACATGCAGATTTCAATTCGGGTTCAAGTTGGTCACAAATTTACCACACTGACCAACAGAAAGCTGCTTGGTTTGAAAGTGAATTAATTTGACTTTTTGTCTGAGAAATTGTATAAATTAGACTGCACCTTAAGACTTTTGATGACTATAGATACATTAAGCTGGAAATAAATCATATCAGTACCAATGATGTCATATTTCAGAAAAACATACTTGTCAACAGAATCAAATGGTCGTTTGAGTGGTGGGGGGCGGGCCTTGACTTTTTTAGGTGGTGCATCTTTATCACCATGAGACTGAGTTGGGGCAGGATCTGATCCAGAGGGAGGAGGTAATGGAGAAGAAGGGTGGGAGTCCTTCCAATCAGCCTCCTTAGCGTTTGCTTCTTTGCCACGTCCACTATAGGTACCACTTTCCGCTACAGAGTGGGTGGGGGCTTCAGTGGACCCCTCCTCTGGTGGAAGCGTTGCTGGGGAACTCGTCTCAGCTGCCTTGTCTATCTCAAATGAGAACCGACTACCACTCTCTTTGTCCTTCTCTCGCTCTCTCTCTTTCTCCCTTTCCCTCTCCTTGTCTCGTTCTTTGCCTCTCCCTCCTCCATCATAACTGCCCACAGGGATGTTGGCCACTGTGGCTTTCACTTTCTGAGGAGGCCTTGCTGCGATCAGTTTGGGTGTCCCCGGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110280 True 784 lncRNA 0.46 2 4628038 4629281

Neighbor

gene id symbol gene type direction distance location
CI01000016_04422169_04424433 RABAC1 coding downstream 203605 4421995 ~ 4424433 (-)
CI01000016_04385978_04389107 NA coding downstream 237968 4385722 ~ 4390070 (-)
CI01000016_04370577_04377413 NA coding downstream 249921 4370042 ~ 4378117 (-)
CI01000016_04333323_04333836 NA coding downstream 294202 4332873 ~ 4333836 (-)
CI01000016_04300720_04301736 NA coding downstream 324531 4300649 ~ 4303507 (-)
CI01000016_04636548_04646848 ZNF526 coding upstream 6546 4635827 ~ 4646916 (-)
CI01000016_04696937_04698098 NA coding upstream 67404 4696685 ~ 4698618 (-)
CI01000016_04802496_04812976 NA coding upstream 173173 4802454 ~ 4813266 (-)
CI01000016_04921091_04922518 NA coding upstream 291587 4918975 ~ 4922518 (-)
CI01000016_04927541_04930989 PAFAH1B3 coding upstream 296813 4926094 ~ 4930989 (-)
G96915 NA non-coding downstream 597 4620698 ~ 4627441 (-)
G96970 NA non-coding downstream 22504 4605090 ~ 4605534 (-)
G96969 NA non-coding downstream 23524 4604074 ~ 4604514 (-)
G96968 NA non-coding downstream 24110 4603579 ~ 4603928 (-)
G96967 NA non-coding downstream 24908 4602831 ~ 4603130 (-)
G96916 NA non-coding upstream 20206 4649487 ~ 4654397 (-)
G96977 NA non-coding upstream 35478 4664759 ~ 4664982 (-)
G96983 NA non-coding upstream 57580 4686861 ~ 4687114 (-)
G97050 NA non-coding upstream 187349 4816630 ~ 4897720 (-)
G97069 NA non-coding upstream 222819 4852100 ~ 4853062 (-)
CI01000016_03921124_03930996 NA other downstream 696987 3920055 ~ 3931162 (-)
CI01000016_03647744_03675574 NA other downstream 962725 3647653 ~ 3675585 (-)
G95070 NA other downstream 1642397 2985260 ~ 2985641 (-)
G94786 NA other downstream 2351763 2270836 ~ 2276275 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 696238 5325519 ~ 5332874 (-)
CI01000016_05412782_05415867 NA other upstream 782978 5412248 ~ 5415906 (-)
G97341 NA other upstream 1529705 6158986 ~ 6159721 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 4259552 8888833 ~ 8894737 (-)

Expression


Co-expression Network