G95871


Basic Information

Item Value
gene id G95871
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5411482 ~ 5411703 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU109034
ACTTATCAAAACAAAGAATTACTCAGAGAAGACACTTGTATCACAGATGTTTTGTTTCCCGGACAGGTCTTGTGTTCATAGCAAGTTGCTTTCTGCAGTCTTTTTATCATGTCTGTCGCCCCCTACTGTTTGATCTGTCTATAACATTTCATGACACTACATGCAAATTGGCCTCTTATTTTAATAGAATACGTGATTTAAACGTTCGGACGTAAACACGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109034 True 222 lncRNA 0.38 1 5411482 5411703

Neighbor

gene id symbol gene type direction distance location
CI01000016_05405791_05407797 AICDA coding upstream 3519 5405791 ~ 5407963 (+)
CI01000016_05398036_05400369 NAT14 coding upstream 11076 5398036 ~ 5400406 (+)
CI01000016_05388832_05396460 ZNF628 coding upstream 14402 5388832 ~ 5397080 (+)
CI01000016_05381573_05383796 NA coding upstream 27664 5380917 ~ 5383818 (+)
CI01000016_05335334_05352325 RASIP1 coding upstream 58815 5335334 ~ 5352667 (+)
CI01000016_05445824_05454816 EPN1 coding downstream 34121 5445824 ~ 5455416 (+)
CI01000016_05475350_05482964 U2AF2, U2AF2A, U2AF2B coding downstream 63647 5475350 ~ 5483946 (+)
CI01000016_05488887_05502270 CACNG6B coding downstream 77184 5484205 ~ 5504239 (+)
CI01000016_05698858_05706081 NA coding downstream 287155 5698858 ~ 5706719 (+)
CI01000016_05797506_05798075 NA coding downstream 385803 5797506 ~ 5799585 (+)
G95824 NA non-coding upstream 36215 5371328 ~ 5375267 (+)
G95814 NA non-coding upstream 81824 5327611 ~ 5329658 (+)
G95793 NA non-coding upstream 85567 5233196 ~ 5325915 (+)
G95845 NA non-coding upstream 153315 5256601 ~ 5258167 (+)
G95844 NA non-coding upstream 154582 5256515 ~ 5256900 (+)
G95803 NA non-coding downstream 535 5412238 ~ 5418215 (+)
G95876 NA non-coding downstream 9464 5421167 ~ 5421768 (+)
G95880 NA non-coding downstream 13666 5425369 ~ 5434373 (+)
G95801 NA non-coding downstream 46139 5457842 ~ 5458207 (+)
G95805 NA non-coding downstream 50187 5461890 ~ 5462142 (+)
G95792 NA other upstream 185541 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 574827 4829592 ~ 4837457 (+)
G95648 NA other upstream 1137577 4272636 ~ 4273905 (+)
G95439 NA other upstream 1547625 3862175 ~ 3862305 (+)
G96389 NA other downstream 1748938 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 2372362 7783987 ~ 7784996 (+)
G97824 NA other downstream 2602660 8014363 ~ 8015775 (+)
G98288 NA other downstream 3584395 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 4383928 9795950 ~ 9842576 (+)

Expression


Co-expression Network