G95805


Basic Information

Item Value
gene id G95805
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5461890 ~ 5462142 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU108965
TAGCAGCTTGTCAGGTTCAGTGTTGGAGGTTGGATGAATGTTAGCGTTCTGGTTTTGGTTTAGGTTGGGGATAAAACTAGAGTTAGTATTGGGTGTATTTGGGTTGAAGTTGCCGTTGGTATTGAGGTTTGGGTTAAAAGTAGAGTTTGGGTTGGTATACTGGTTAATATTGGGGTTTGGACAGGGGCAGGGGGAGAGAGGAGGCAGGGTTGGGGTGTGGAGTGGTGTACTATCATGGGTAAATCCAAGTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108965 True 253 lncRNA 0.45 1 5461890 5462142

Neighbor

gene id symbol gene type direction distance location
CI01000016_05445824_05454816 EPN1 coding upstream 6474 5445824 ~ 5455416 (+)
CI01000016_05405791_05407797 AICDA coding upstream 53927 5405791 ~ 5407963 (+)
CI01000016_05398036_05400369 NAT14 coding upstream 61484 5398036 ~ 5400406 (+)
CI01000016_05388832_05396460 ZNF628 coding upstream 64810 5388832 ~ 5397080 (+)
CI01000016_05381573_05383796 NA coding upstream 78072 5380917 ~ 5383818 (+)
CI01000016_05475350_05482964 U2AF2, U2AF2A, U2AF2B coding downstream 13208 5475350 ~ 5483946 (+)
CI01000016_05488887_05502270 CACNG6B coding downstream 26745 5484205 ~ 5504239 (+)
CI01000016_05698858_05706081 NA coding downstream 236716 5698858 ~ 5706719 (+)
CI01000016_05797506_05798075 NA coding downstream 335364 5797506 ~ 5799585 (+)
CI01000016_05828974_05833309 JOSD2, JOS2 coding downstream 366256 5828398 ~ 5833377 (+)
G95801 NA non-coding upstream 3683 5457842 ~ 5458207 (+)
G95880 NA non-coding upstream 27517 5425369 ~ 5434373 (+)
G95876 NA non-coding upstream 40122 5421167 ~ 5421768 (+)
G95803 NA non-coding upstream 43675 5412238 ~ 5418215 (+)
G95871 NA non-coding upstream 50187 5411482 ~ 5411703 (+)
G95884 NA non-coding downstream 576 5462718 ~ 5462924 (+)
G95885 NA non-coding downstream 886 5463028 ~ 5463257 (+)
G95804 NA non-coding downstream 4528 5466670 ~ 5466983 (+)
G95831 NA non-coding downstream 32099 5494241 ~ 5494914 (+)
G95792 NA other upstream 235949 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 625235 4829592 ~ 4837457 (+)
G95648 NA other upstream 1187985 4272636 ~ 4273905 (+)
G95439 NA other upstream 1598033 3862175 ~ 3862305 (+)
G96389 NA other downstream 1698499 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 2321923 7783987 ~ 7784996 (+)
G97824 NA other downstream 2552221 8014363 ~ 8015775 (+)
G98288 NA other downstream 3533956 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 4333489 9795950 ~ 9842576 (+)

Expression


Co-expression Network