Gene
RNA
| Item | Value |
|---|---|
| gene id | G95889 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 5498268 ~ 5498957 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU109056 | True | 690 | lncRNA | 0.35 | 1 | 5498268 | 5498957 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000016_05475350_05482964 | U2AF2, U2AF2A, U2AF2B | coding | upstream | 14322 | 5475350 ~ 5483946 (+) |
| CI01000016_05445824_05454816 | EPN1 | coding | upstream | 42852 | 5445824 ~ 5455416 (+) |
| CI01000016_05405791_05407797 | AICDA | coding | upstream | 90305 | 5405791 ~ 5407963 (+) |
| CI01000016_05398036_05400369 | NAT14 | coding | upstream | 97862 | 5398036 ~ 5400406 (+) |
| CI01000016_05388832_05396460 | ZNF628 | coding | upstream | 101188 | 5388832 ~ 5397080 (+) |
| CI01000016_05698858_05706081 | NA | coding | downstream | 199901 | 5698858 ~ 5706719 (+) |
| CI01000016_05797506_05798075 | NA | coding | downstream | 298549 | 5797506 ~ 5799585 (+) |
| CI01000016_05828974_05833309 | JOSD2, JOS2 | coding | downstream | 329441 | 5828398 ~ 5833377 (+) |
| CI01000016_05837368_05837667 | NA | coding | downstream | 337626 | 5836583 ~ 5837927 (+) |
| CI01000016_05878037_05885761 | FLCN | coding | downstream | 379080 | 5878037 ~ 5886192 (+) |
| G95888 | NA | non-coding | upstream | 1426 | 5496643 ~ 5496842 (+) |
| G95831 | NA | non-coding | upstream | 3354 | 5494241 ~ 5494914 (+) |
| G95804 | NA | non-coding | upstream | 31285 | 5466670 ~ 5466983 (+) |
| G95885 | NA | non-coding | upstream | 35011 | 5463028 ~ 5463257 (+) |
| G95884 | NA | non-coding | upstream | 35344 | 5462718 ~ 5462924 (+) |
| G95890 | NA | non-coding | downstream | 401 | 5499358 ~ 5499655 (+) |
| G95891 | NA | non-coding | downstream | 833 | 5499790 ~ 5500142 (+) |
| G95892 | NA | non-coding | downstream | 1460 | 5500417 ~ 5500794 (+) |
| G95893 | NA | non-coding | downstream | 1871 | 5500828 ~ 5501124 (+) |
| G95894 | NA | non-coding | downstream | 2174 | 5501131 ~ 5501351 (+) |
| G95792 | NA | other | upstream | 272327 | 5219880 ~ 5225941 (+) |
| CI01000016_04829592_04837305 | NA | other | upstream | 661613 | 4829592 ~ 4837457 (+) |
| G95648 | NA | other | upstream | 1224363 | 4272636 ~ 4273905 (+) |
| G95439 | NA | other | upstream | 1634411 | 3862175 ~ 3862305 (+) |
| G96389 | NA | other | downstream | 1661684 | 7160641 ~ 7161290 (+) |
| CI01000016_07784248_07784757 | TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S | other | downstream | 2285108 | 7783987 ~ 7784996 (+) |
| G97824 | NA | other | downstream | 2515406 | 8014363 ~ 8015775 (+) |
| G98288 | NA | other | downstream | 3497141 | 8996098 ~ 9002717 (+) |
| CI01000016_09796196_09842235 | NA | other | downstream | 4296674 | 9795950 ~ 9842576 (+) |
