G95896


Basic Information

Item Value
gene id G95896
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5545739 ~ 5545986 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU109063
CTGAGGCAATGGAACGATGAACCGCAGAGCAGAGAAGCACTTAACAGTCCCAGTGCGGAAAATACACACGCAAATATACACACATTCACATTAGTATGTCGTTGAAAGCTGAAGTATTTGTTGTTGTTGTTTTTAATATTAAAATACATTTAATATTCCGTTGTAGTGGAGGGACAAATAAGTAAGCTATTACCTTGATTTCCCCGAAAATGTTTACTGTCTTTTTGGCGCGATAAAACATTTCTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109063 True 248 lncRNA 0.37 1 5545739 5545986

Neighbor

gene id symbol gene type direction distance location
CI01000016_05488887_05502270 CACNG6B coding upstream 43389 5484205 ~ 5504239 (+)
CI01000016_05475350_05482964 U2AF2, U2AF2A, U2AF2B coding upstream 61793 5475350 ~ 5483946 (+)
CI01000016_05445824_05454816 EPN1 coding upstream 90323 5445824 ~ 5455416 (+)
CI01000016_05405791_05407797 AICDA coding upstream 137776 5405791 ~ 5407963 (+)
CI01000016_05398036_05400369 NAT14 coding upstream 145333 5398036 ~ 5400406 (+)
CI01000016_05698858_05706081 NA coding downstream 152872 5698858 ~ 5706719 (+)
CI01000016_05797506_05798075 NA coding downstream 251520 5797506 ~ 5799585 (+)
CI01000016_05828974_05833309 JOSD2, JOS2 coding downstream 282412 5828398 ~ 5833377 (+)
CI01000016_05837368_05837667 NA coding downstream 290597 5836583 ~ 5837927 (+)
CI01000016_05878037_05885761 FLCN coding downstream 332051 5878037 ~ 5886192 (+)
G95811 NA non-coding upstream 17700 5519138 ~ 5528039 (+)
G95894 NA non-coding upstream 44388 5501131 ~ 5501351 (+)
G95893 NA non-coding upstream 44615 5500828 ~ 5501124 (+)
G95892 NA non-coding upstream 44945 5500417 ~ 5500794 (+)
G95897 NA non-coding downstream 160 5546146 ~ 5546391 (+)
G95898 NA non-coding downstream 17329 5563315 ~ 5563610 (+)
G95813 NA non-coding downstream 19226 5565212 ~ 5566153 (+)
G95902 NA non-coding downstream 33585 5579571 ~ 5581894 (+)
G95905 NA non-coding downstream 54802 5600788 ~ 5601022 (+)
G95792 NA other upstream 319798 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 709084 4829592 ~ 4837457 (+)
G95648 NA other upstream 1271834 4272636 ~ 4273905 (+)
G95439 NA other upstream 1681882 3862175 ~ 3862305 (+)
G96389 NA other downstream 1614655 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 2238079 7783987 ~ 7784996 (+)
G97824 NA other downstream 2468377 8014363 ~ 8015775 (+)
G98288 NA other downstream 3450112 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 4249645 9795950 ~ 9842576 (+)

Expression


Co-expression Network