G95813


Basic Information

Item Value
gene id G95813
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5565212 ~ 5566153 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU108973
TTGAAAACACAAAACAACTCAATACAAAATTATTGTGCAATGGTTCTATCTATCTATCTATGTATCTATCTGTGCATTTAATCAAATCAGTTTTGATACTGAGGTTTAACTGTTTATTGTGATTGGAAACACATACAGACATTGTAAACAGTGTAATTACATCAATACATAGAATTTTCACTAATCAGTACATTAATATTTAAGCATTTTTAATCTAATGTTTGTTTGCGTAGATCTACTTTGCTACAAAGTTTAGTTCCAACCCCAAATCAAACACCGCTGCTAAGTGGTTGGATTCAACAGAAAGTAACAGGCAGGTGTGAGGTAAATGGAACTAAATCTGCAGAAATGTACAGTATATCTCCAGGAGCACCCTGGTTTACAAAGTATCCCATTTACAAAACCACAAGATCAGCAACCCTGTGATAAAATAAAAGGCTGGGGAAATCTGACCATGACCAGGCAGTAATCAGTAAATTTTGCCTTGTTACAAATTCCAGGGATAATGGACATGATACCGAAAAGTATGTTTTTTAATTAGTAAATTAATTTCAATTATCTTCATCATACCTTCACACATCTGCTTTCACCTAACCTGTCACTCCTCCTCTCCTATCTTTCCCACGTCCTACTTTTCTGTTGGCAGTATTTTGACGTCAGTGCAACGTTCAAGTTGTTTTAGTTGGGCATTTTGGGCACAGTGTGCAGCCGCAGATCTTTCCAGGTCAGACATCATGAATTTCACTATGCAAGACAAGTTCATGCTGATCTCTGAGACCTCATAGTGACCATATTCATATAGTACCAGCTTCAACCAAATAAACACAACACCAATTAATTCATCCATAAACACGAGAATTCAAAGGCAGATTTGAGACCATTTTGGCAATATAATAAGTAACACTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCA

Function

NR:

description
uncharacterized protein LOC110510599

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108973 True 942 lncRNA 0.36 1 5565212 5566153

Neighbor

gene id symbol gene type direction distance location
CI01000016_05488887_05502270 CACNG6B coding upstream 62862 5484205 ~ 5504239 (+)
CI01000016_05475350_05482964 U2AF2, U2AF2A, U2AF2B coding upstream 81266 5475350 ~ 5483946 (+)
CI01000016_05445824_05454816 EPN1 coding upstream 109796 5445824 ~ 5455416 (+)
CI01000016_05405791_05407797 AICDA coding upstream 157249 5405791 ~ 5407963 (+)
CI01000016_05398036_05400369 NAT14 coding upstream 164806 5398036 ~ 5400406 (+)
CI01000016_05698858_05706081 NA coding downstream 132705 5698858 ~ 5706719 (+)
CI01000016_05797506_05798075 NA coding downstream 231353 5797506 ~ 5799585 (+)
CI01000016_05828974_05833309 JOSD2, JOS2 coding downstream 262245 5828398 ~ 5833377 (+)
CI01000016_05837368_05837667 NA coding downstream 270430 5836583 ~ 5837927 (+)
CI01000016_05878037_05885761 FLCN coding downstream 311884 5878037 ~ 5886192 (+)
G95898 NA non-coding upstream 1602 5563315 ~ 5563610 (+)
G95897 NA non-coding upstream 18821 5546146 ~ 5546391 (+)
G95896 NA non-coding upstream 19226 5545739 ~ 5545986 (+)
G95811 NA non-coding upstream 37173 5519138 ~ 5528039 (+)
G95894 NA non-coding upstream 63861 5501131 ~ 5501351 (+)
G95902 NA non-coding downstream 13418 5579571 ~ 5581894 (+)
G95905 NA non-coding downstream 34635 5600788 ~ 5601022 (+)
G95906 NA non-coding downstream 35011 5601164 ~ 5601424 (+)
G95908 NA non-coding downstream 36653 5602806 ~ 5603260 (+)
G95909 NA non-coding downstream 37149 5603302 ~ 5603833 (+)
G95792 NA other upstream 339271 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 728557 4829592 ~ 4837457 (+)
G95648 NA other upstream 1291307 4272636 ~ 4273905 (+)
G95439 NA other upstream 1701355 3862175 ~ 3862305 (+)
G96389 NA other downstream 1594488 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 2217912 7783987 ~ 7784996 (+)
G97824 NA other downstream 2448210 8014363 ~ 8015775 (+)
G98288 NA other downstream 3429945 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 4229478 9795950 ~ 9842576 (+)

Expression


Co-expression Network