G95902


Basic Information

Item Value
gene id G95902
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5579571 ~ 5581894 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU109070
GCCAAAACTCCCTTTGCCCAGAACCATGAGGAAGTTGAAATCGTGCAGTCCGACTTGGCCTTTGCCCGTGTGCAGTACAGTGGGAGTCGGACTCAGAGCAGGCGGGGTCACAGCAGGAACAGGCGTTGTCACGGTAACAGTAGCAGGAGGAATAGAGGGTGGGATAGCAGCATCTGGTACCTGCAGGTCTGGGTCGGGTACAGGGATGTTATAATACTCTCCCTCATCCTGGTTGAGTAGTTTGAACCAGCCGCTGACGGAACGTCTGAATATCTCACTAACGCCGAACGACAGAGCGCCCATGAAGTCATTCCTTGAGGTCCGATCCCAGTCCCAGACCTCTACAGACAAACGCCTGTCCCACTGCCTCCCACGCACTGAACTACACTCAGACAGAAGGAAAGAGAGAGATAGCCTAGCATCCACTTAGAAGACCTTAGCAACTGCATAGCAACACCTTGGCAACCACCCACAACACGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109070 True 481 lncRNA 0.54 2 5579571 5581894

Neighbor

gene id symbol gene type direction distance location
CI01000016_05488887_05502270 CACNG6B coding upstream 77221 5484205 ~ 5504239 (+)
CI01000016_05475350_05482964 U2AF2, U2AF2A, U2AF2B coding upstream 95625 5475350 ~ 5483946 (+)
CI01000016_05445824_05454816 EPN1 coding upstream 124155 5445824 ~ 5455416 (+)
CI01000016_05405791_05407797 AICDA coding upstream 171608 5405791 ~ 5407963 (+)
CI01000016_05398036_05400369 NAT14 coding upstream 179165 5398036 ~ 5400406 (+)
CI01000016_05698858_05706081 NA coding downstream 116964 5698858 ~ 5706719 (+)
CI01000016_05797506_05798075 NA coding downstream 215612 5797506 ~ 5799585 (+)
CI01000016_05828974_05833309 JOSD2, JOS2 coding downstream 246504 5828398 ~ 5833377 (+)
CI01000016_05837368_05837667 NA coding downstream 254689 5836583 ~ 5837927 (+)
CI01000016_05878037_05885761 FLCN coding downstream 296143 5878037 ~ 5886192 (+)
G95813 NA non-coding upstream 13418 5565212 ~ 5566153 (+)
G95898 NA non-coding upstream 15961 5563315 ~ 5563610 (+)
G95897 NA non-coding upstream 33180 5546146 ~ 5546391 (+)
G95896 NA non-coding upstream 33585 5545739 ~ 5545986 (+)
G95811 NA non-coding upstream 51532 5519138 ~ 5528039 (+)
G95905 NA non-coding downstream 18894 5600788 ~ 5601022 (+)
G95906 NA non-coding downstream 19270 5601164 ~ 5601424 (+)
G95908 NA non-coding downstream 20912 5602806 ~ 5603260 (+)
G95909 NA non-coding downstream 21408 5603302 ~ 5603833 (+)
G95910 NA non-coding downstream 22248 5604142 ~ 5604959 (+)
G95792 NA other upstream 353630 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 742916 4829592 ~ 4837457 (+)
G95648 NA other upstream 1305666 4272636 ~ 4273905 (+)
G95439 NA other upstream 1715714 3862175 ~ 3862305 (+)
G96389 NA other downstream 1578747 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 2202171 7783987 ~ 7784996 (+)
G97824 NA other downstream 2432469 8014363 ~ 8015775 (+)
G98288 NA other downstream 3414204 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 4213737 9795950 ~ 9842576 (+)

Expression


Co-expression Network