Gene
RNA
| Item | Value |
|---|---|
| gene id | G95918 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 5610878 ~ 5615490 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC108267897 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU109088 | True | 4613 | lncRNA | 0.36 | 1 | 5610878 | 5615490 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000016_05488887_05502270 | CACNG6B | coding | upstream | 108528 | 5484205 ~ 5504239 (+) |
| CI01000016_05475350_05482964 | U2AF2, U2AF2A, U2AF2B | coding | upstream | 126932 | 5475350 ~ 5483946 (+) |
| CI01000016_05445824_05454816 | EPN1 | coding | upstream | 155462 | 5445824 ~ 5455416 (+) |
| CI01000016_05405791_05407797 | AICDA | coding | upstream | 202915 | 5405791 ~ 5407963 (+) |
| CI01000016_05398036_05400369 | NAT14 | coding | upstream | 210472 | 5398036 ~ 5400406 (+) |
| CI01000016_05698858_05706081 | NA | coding | downstream | 83368 | 5698858 ~ 5706719 (+) |
| CI01000016_05797506_05798075 | NA | coding | downstream | 182016 | 5797506 ~ 5799585 (+) |
| CI01000016_05828974_05833309 | JOSD2, JOS2 | coding | downstream | 212908 | 5828398 ~ 5833377 (+) |
| CI01000016_05837368_05837667 | NA | coding | downstream | 221093 | 5836583 ~ 5837927 (+) |
| CI01000016_05878037_05885761 | FLCN | coding | downstream | 262547 | 5878037 ~ 5886192 (+) |
| G95915 | NA | non-coding | upstream | 2969 | 5607627 ~ 5607909 (+) |
| G95914 | NA | non-coding | upstream | 3535 | 5606703 ~ 5607343 (+) |
| G95913 | NA | non-coding | upstream | 4605 | 5605992 ~ 5606273 (+) |
| G95912 | NA | non-coding | upstream | 4892 | 5605419 ~ 5605986 (+) |
| G95911 | NA | non-coding | upstream | 5662 | 5604971 ~ 5605216 (+) |
| G95933 | NA | non-coding | downstream | 34362 | 5649852 ~ 5653635 (+) |
| G96034 | NA | non-coding | downstream | 111355 | 5726845 ~ 5727075 (+) |
| G96035 | NA | non-coding | downstream | 116767 | 5732257 ~ 5732463 (+) |
| G96047 | NA | non-coding | downstream | 140148 | 5755638 ~ 5755894 (+) |
| G96048 | NA | non-coding | downstream | 140607 | 5756097 ~ 5756378 (+) |
| G95792 | NA | other | upstream | 384937 | 5219880 ~ 5225941 (+) |
| CI01000016_04829592_04837305 | NA | other | upstream | 774223 | 4829592 ~ 4837457 (+) |
| G95648 | NA | other | upstream | 1336973 | 4272636 ~ 4273905 (+) |
| G95439 | NA | other | upstream | 1747021 | 3862175 ~ 3862305 (+) |
| G96389 | NA | other | downstream | 1545151 | 7160641 ~ 7161290 (+) |
| CI01000016_07784248_07784757 | TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S | other | downstream | 2168575 | 7783987 ~ 7784996 (+) |
| G97824 | NA | other | downstream | 2398873 | 8014363 ~ 8015775 (+) |
| G98288 | NA | other | downstream | 3380608 | 8996098 ~ 9002717 (+) |
| CI01000016_09796196_09842235 | NA | other | downstream | 4180141 | 9795950 ~ 9842576 (+) |
