G95992


Basic Information

Item Value
gene id G95992
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 6727127 ~ 6727496 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU109174
TTGGACAGGTGATGAGCAGTGCCTGGTTTTCTCCACACATACCGCTTAGAATTAAGGCCAAAAAGTTCTATCTTGGTCTCATCAGACCAGAGAATCTTATTTCTCACCATCTTGGAGTCCTTCATGCGGGCTTTCATGTGTCTTGCACTGAGGAGAGGCTTCCGTCGGGCCACTCTACCATAAAGCCCCGACTGGTGGAGGGCTGCAGTGATGGTTGACTTTCTACAACTTTCTCCCATCTCCCGACTGCATCTCTGGAGCTCAGCCACAGTGATCTTTGGGTTCTTCTTTACCTCTCTCACCAAGGCTCTTCTCCCCCGATAGTTCAGTTTGGCCAGACGGCCAGCTCTAGGAAGGGTTCTGGTCGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109174 True 370 lncRNA 0.51 1 6727127 6727496

Neighbor

gene id symbol gene type direction distance location
CI01000016_06684506_06687365 NA coding upstream 39722 6684506 ~ 6687405 (+)
CI01000016_06398455_06420062 MTBP coding upstream 306989 6398455 ~ 6420138 (+)
CI01000016_06270425_06375483 COL14A1A, COL14A1 coding upstream 351644 6270425 ~ 6375483 (+)
CI01000016_06174800_06210259 DEPDC6, DEPTOR coding upstream 516096 6174800 ~ 6211031 (+)
CI01000016_06158996_06159538 NA coding upstream 567402 6158722 ~ 6159725 (+)
CI01000016_06756366_06782229 SETD2 coding downstream 28870 6756366 ~ 6782619 (+)
CI01000016_06813604_06813789 NA coding downstream 86108 6809807 ~ 6814285 (+)
CI01000016_06890651_06904100 NA coding downstream 162650 6890146 ~ 6904634 (+)
CI01000016_06954301_06958598 NA coding downstream 226805 6954301 ~ 6958603 (+)
CI01000016_07178060_07180135 NA coding downstream 450564 7178060 ~ 7180810 (+)
G96236 NA non-coding upstream 35284 6691190 ~ 6691843 (+)
G96163 NA non-coding upstream 242351 6484577 ~ 6484776 (+)
G95974 NA non-coding upstream 350147 6376100 ~ 6376980 (+)
G96011 NA non-coding upstream 479890 6239836 ~ 6247237 (+)
G95949 NA non-coding upstream 513494 6212978 ~ 6213633 (+)
G96257 NA non-coding downstream 79225 6806721 ~ 6807026 (+)
G96299 NA non-coding downstream 195863 6923359 ~ 6924302 (+)
G96305 NA non-coding downstream 202910 6930406 ~ 6935195 (+)
G96308 NA non-coding downstream 208192 6935688 ~ 6936001 (+)
CI01000016_05405791_05407797 AICDA other upstream 1319264 5405791 ~ 5407963 (+)
G95792 NA other upstream 1501186 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 1890472 4829592 ~ 4837457 (+)
G95648 NA other upstream 2453222 4272636 ~ 4273905 (+)
G95439 NA other upstream 2863270 3862175 ~ 3862305 (+)
G96389 NA other downstream 433145 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 1056569 7783987 ~ 7784996 (+)
G97824 NA other downstream 1286867 8014363 ~ 8015775 (+)
G98288 NA other downstream 2268602 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 3068135 9795950 ~ 9842576 (+)

Expression


Co-expression Network