G96342


Basic Information

Item Value
gene id G96342
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 7061225 ~ 7061427 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU109590
TTTTTGAAGAATACGAAAGTGCGGTTTTGGCAGAAGCACTTGGAAGGCGATCATTTGTTTATATAAAGCATATACATTTACATTTATTTCGAAAATGACTGATTGTTTTGCTAGATAAGACCCTTATTCGTTGTCTGGTATCGTTTAAAGCCCTTTGAAGCTGCACTGAAACTGTAATTTTGACCTTCAACCGTTTGGAGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109590 True 203 lncRNA 0.36 1 7061225 7061427

Neighbor

gene id symbol gene type direction distance location
CI01000016_06954301_06958598 NA coding upstream 102622 6954301 ~ 6958603 (+)
CI01000016_06890651_06904100 NA coding upstream 156591 6890146 ~ 6904634 (+)
CI01000016_06813604_06813789 NA coding upstream 247288 6809807 ~ 6814285 (+)
CI01000016_06756366_06782229 SETD2 coding upstream 278606 6756366 ~ 6782619 (+)
CI01000016_06684506_06687365 NA coding upstream 373820 6684506 ~ 6687405 (+)
CI01000016_07178060_07180135 NA coding downstream 116633 7178060 ~ 7180810 (+)
CI01000016_07214392_07233533 RXRBB, RXRBA, RXRB coding downstream 152965 7214392 ~ 7234962 (+)
CI01000016_07445055_07456795 SLC6A19B coding downstream 383628 7445055 ~ 7457431 (+)
CI01000016_07463735_07471367 NA coding downstream 402308 7463735 ~ 7471828 (+)
CI01000016_07484583_07551063 NA coding downstream 423156 7484583 ~ 7551063 (+)
G96341 NA non-coding upstream 1629 7059136 ~ 7059596 (+)
G96339 NA non-coding upstream 3517 7057506 ~ 7057708 (+)
G96338 NA non-coding upstream 4125 7056417 ~ 7057100 (+)
G96335 NA non-coding upstream 11332 7049376 ~ 7049893 (+)
G96306 NA non-coding upstream 19439 6973117 ~ 7041786 (+)
G96344 NA non-coding downstream 2132 7063559 ~ 7063804 (+)
G96347 NA non-coding downstream 5812 7067239 ~ 7067621 (+)
G96350 NA non-coding downstream 9965 7071392 ~ 7072805 (+)
G96359 NA non-coding downstream 23941 7085368 ~ 7085785 (+)
G96365 NA non-coding downstream 44552 7105979 ~ 7106207 (+)
CI01000016_05405791_05407797 AICDA other upstream 1653362 5405791 ~ 5407963 (+)
G95792 NA other upstream 1835284 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 2224570 4829592 ~ 4837457 (+)
G95648 NA other upstream 2787320 4272636 ~ 4273905 (+)
G95439 NA other upstream 3197368 3862175 ~ 3862305 (+)
G96389 NA other downstream 99214 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 722638 7783987 ~ 7784996 (+)
G97824 NA other downstream 952936 8014363 ~ 8015775 (+)
G98288 NA other downstream 1934671 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 2734204 9795950 ~ 9842576 (+)

Expression


Co-expression Network