G96376


Basic Information

Item Value
gene id G96376
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 7117230 ~ 7117462 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU109624
GTGGAAGATTCTTAATCTTGTCTATTTTTTTTCTTAGCCAGTCAGAATCATTTTTACCTAAGTAATGATGTAGTTAGTGGACTCTGTTAGAGTATAATTGTTGTAGAAATGTGAATGTACGCAGAGCGGCCTACAAACTCTTTGTGAGACTTATAAAACTTCTAACGATTCTTCAGTAAAATTTTCTTCAATTTTTTTTTTTTTTTTTAACTTTTTTTTAAAAAAAGGTCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109624 True 233 lncRNA 0.29 1 7117230 7117462

Neighbor

gene id symbol gene type direction distance location
CI01000016_06954301_06958598 NA coding upstream 158627 6954301 ~ 6958603 (+)
CI01000016_06890651_06904100 NA coding upstream 212596 6890146 ~ 6904634 (+)
CI01000016_06813604_06813789 NA coding upstream 303293 6809807 ~ 6814285 (+)
CI01000016_06756366_06782229 SETD2 coding upstream 334611 6756366 ~ 6782619 (+)
CI01000016_06684506_06687365 NA coding upstream 429825 6684506 ~ 6687405 (+)
CI01000016_07178060_07180135 NA coding downstream 60598 7178060 ~ 7180810 (+)
CI01000016_07214392_07233533 RXRBB, RXRBA, RXRB coding downstream 96930 7214392 ~ 7234962 (+)
CI01000016_07445055_07456795 SLC6A19B coding downstream 327593 7445055 ~ 7457431 (+)
CI01000016_07463735_07471367 NA coding downstream 346273 7463735 ~ 7471828 (+)
CI01000016_07484583_07551063 NA coding downstream 367121 7484583 ~ 7551063 (+)
G96365 NA non-coding upstream 11023 7105979 ~ 7106207 (+)
G96359 NA non-coding upstream 31445 7085368 ~ 7085785 (+)
G96350 NA non-coding upstream 44425 7071392 ~ 7072805 (+)
G96347 NA non-coding upstream 49609 7067239 ~ 7067621 (+)
G96344 NA non-coding upstream 53426 7063559 ~ 7063804 (+)
G96383 NA non-coding downstream 22813 7140275 ~ 7140478 (+)
G96392 NA non-coding downstream 47141 7164603 ~ 7164834 (+)
G96396 NA non-coding downstream 51221 7168683 ~ 7169000 (+)
G96397 NA non-coding downstream 64549 7182011 ~ 7182239 (+)
G96405 NA non-coding downstream 87689 7205151 ~ 7205501 (+)
CI01000016_05405791_05407797 AICDA other upstream 1709367 5405791 ~ 5407963 (+)
G95792 NA other upstream 1891289 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 2280575 4829592 ~ 4837457 (+)
G95648 NA other upstream 2843325 4272636 ~ 4273905 (+)
G95439 NA other upstream 3253373 3862175 ~ 3862305 (+)
G96389 NA other downstream 43179 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 666603 7783987 ~ 7784996 (+)
G97824 NA other downstream 896901 8014363 ~ 8015775 (+)
G98288 NA other downstream 1878636 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 2678169 9795950 ~ 9842576 (+)

Expression


Co-expression Network