G96406


Basic Information

Item Value
gene id G96406
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 7205589 ~ 7211423 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU109654
AAGAAAACCAGTGGGAAGTTTAGGTCACAAAACATTACAAAACGAATGTGTAAAATATGCGACTCTAAATACTTGCAATAGAAAATCTTACCATTAAAGCATACAAATGGCCTTTTTGAGTCACAGCTATCACTAAACCATTCCCCATTGTTGTTCATTGCAGCACAGCCATGATTATTATTTTGATCTGGTTGTTTATCTTTCCAGTTTTGGAACGGCTCTACATTGGAACTGTCTGGCAGTGTCCAGTGCCATCTGAACACTTCACTTCTATAAAGTCCAATGTACACATCATACGAAACATCACTTATGGTTCTGAACAAGCTGTTCATCTCTTCTGCATTATTCACAGTCGCCAGGTCAGTGTAATTCTCACGGCAGAATCTCTGAGCCTCAGTCCAGTTCTTTCTGATATTTATGAAGTGATACTGGTGAGATATTTGGCTTGAAGTGAAGGACAAAAGCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109654 True 468 lncRNA 0.39 2 7205589 7211423

Neighbor

gene id symbol gene type direction distance location
CI01000016_07178060_07180135 NA coding upstream 24779 7178060 ~ 7180810 (+)
CI01000016_06954301_06958598 NA coding upstream 246986 6954301 ~ 6958603 (+)
CI01000016_06890651_06904100 NA coding upstream 300955 6890146 ~ 6904634 (+)
CI01000016_06813604_06813789 NA coding upstream 391652 6809807 ~ 6814285 (+)
CI01000016_06756366_06782229 SETD2 coding upstream 422970 6756366 ~ 6782619 (+)
CI01000016_07214392_07233533 RXRBB, RXRBA, RXRB coding downstream 2969 7214392 ~ 7234962 (+)
CI01000016_07445055_07456795 SLC6A19B coding downstream 233632 7445055 ~ 7457431 (+)
CI01000016_07463735_07471367 NA coding downstream 252312 7463735 ~ 7471828 (+)
CI01000016_07484583_07551063 NA coding downstream 273160 7484583 ~ 7551063 (+)
CI01000016_07711605_07715888 SP8, SP8B coding downstream 500182 7711605 ~ 7716261 (+)
G96405 NA non-coding upstream 88 7205151 ~ 7205501 (+)
G96397 NA non-coding upstream 23350 7182011 ~ 7182239 (+)
G96396 NA non-coding upstream 36589 7168683 ~ 7169000 (+)
G96392 NA non-coding upstream 40755 7164603 ~ 7164834 (+)
G96383 NA non-coding upstream 65111 7140275 ~ 7140478 (+)
G96276 NA non-coding downstream 23744 7235167 ~ 7242286 (+)
G96414 NA non-coding downstream 52295 7263718 ~ 7264594 (+)
G96415 NA non-coding downstream 73648 7285071 ~ 7286600 (+)
G96283 NA non-coding downstream 98621 7310044 ~ 7311878 (+)
G96389 NA other upstream 44299 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 1797726 5405791 ~ 5407963 (+)
G95792 NA other upstream 1979648 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 2368934 4829592 ~ 4837457 (+)
G95648 NA other upstream 2931684 4272636 ~ 4273905 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 572642 7783987 ~ 7784996 (+)
G97824 NA other downstream 802940 8014363 ~ 8015775 (+)
G98288 NA other downstream 1784675 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 2584208 9795950 ~ 9842576 (+)
G99041 NA other downstream 2712995 9924418 ~ 9925654 (+)

Expression


Co-expression Network