Gene
RNA
| Item | Value |
|---|---|
| gene id | G96283 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 7310044 ~ 7311878 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU109507 | True | 1555 | lncRNA | 0.37 | 2 | 7310044 | 7311878 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000016_07214392_07233533 | RXRBB, RXRBA, RXRB | coding | upstream | 75282 | 7214392 ~ 7234962 (+) |
| CI01000016_07178060_07180135 | NA | coding | upstream | 129234 | 7178060 ~ 7180810 (+) |
| CI01000016_06954301_06958598 | NA | coding | upstream | 351441 | 6954301 ~ 6958603 (+) |
| CI01000016_06890651_06904100 | NA | coding | upstream | 405410 | 6890146 ~ 6904634 (+) |
| CI01000016_06813604_06813789 | NA | coding | upstream | 496107 | 6809807 ~ 6814285 (+) |
| CI01000016_07445055_07456795 | SLC6A19B | coding | downstream | 133177 | 7445055 ~ 7457431 (+) |
| CI01000016_07463735_07471367 | NA | coding | downstream | 151857 | 7463735 ~ 7471828 (+) |
| CI01000016_07484583_07551063 | NA | coding | downstream | 172705 | 7484583 ~ 7551063 (+) |
| CI01000016_07711605_07715888 | SP8, SP8B | coding | downstream | 399727 | 7711605 ~ 7716261 (+) |
| CI01000016_07743396_07746536 | MACC1 | coding | downstream | 431210 | 7743088 ~ 7747383 (+) |
| G96415 | NA | non-coding | upstream | 23444 | 7285071 ~ 7286600 (+) |
| G96414 | NA | non-coding | upstream | 45450 | 7263718 ~ 7264594 (+) |
| G96276 | NA | non-coding | upstream | 67758 | 7235167 ~ 7242286 (+) |
| G96406 | NA | non-coding | upstream | 98621 | 7205589 ~ 7211423 (+) |
| G96453 | NA | non-coding | downstream | 17888 | 7329766 ~ 7331011 (+) |
| G96518 | NA | non-coding | downstream | 242332 | 7554210 ~ 7554540 (+) |
| G97724 | NA | non-coding | downstream | 340164 | 7652042 ~ 7652353 (+) |
| G97760 | NA | non-coding | downstream | 459760 | 7771638 ~ 7771965 (+) |
| G97764 | NA | non-coding | downstream | 466193 | 7778071 ~ 7778392 (+) |
| G96389 | NA | other | upstream | 148754 | 7160641 ~ 7161290 (+) |
| CI01000016_05405791_05407797 | AICDA | other | upstream | 1902181 | 5405791 ~ 5407963 (+) |
| G95792 | NA | other | upstream | 2084103 | 5219880 ~ 5225941 (+) |
| CI01000016_04829592_04837305 | NA | other | upstream | 2473389 | 4829592 ~ 4837457 (+) |
| G95648 | NA | other | upstream | 3036139 | 4272636 ~ 4273905 (+) |
| CI01000016_07784248_07784757 | TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S | other | downstream | 472187 | 7783987 ~ 7784996 (+) |
| G97824 | NA | other | downstream | 702485 | 8014363 ~ 8015775 (+) |
| G98288 | NA | other | downstream | 1684220 | 8996098 ~ 9002717 (+) |
| CI01000016_09796196_09842235 | NA | other | downstream | 2483753 | 9795950 ~ 9842576 (+) |
| G99041 | NA | other | downstream | 2612540 | 9924418 ~ 9925654 (+) |
