G96453


Basic Information

Item Value
gene id G96453
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 7329766 ~ 7331011 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU109704
CGTATTCATACCATTAACTTAATTCCTCCCCTACTCCACAAAACACTCACCCCAGACCTCCGTCCTCCAGCTTTGAGCCTGTGAACTGGCAGGCTGGCAGAGGAGCTCTGTGATCACTGGAGGATGAAGGGTAATGAAGAGGAGGGTGAGCGTGGGATCATTTTTGACAGACCCTCTTAATGCCACACGGCACAACGGAGTCAGAGAGCTTCAGCGATCCGCAATCAGACACGCGCTGATTCAGCTAATCTCCAGTTCCTCTCTGTGGTTTCTGGATGAGTCTCATGAATGTGGTGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109704 True 299 lncRNA 0.51 2 7329766 7331011

Neighbor

gene id symbol gene type direction distance location
CI01000016_07214392_07233533 RXRBB, RXRBA, RXRB coding upstream 95004 7214392 ~ 7234962 (+)
CI01000016_07178060_07180135 NA coding upstream 148956 7178060 ~ 7180810 (+)
CI01000016_06954301_06958598 NA coding upstream 371163 6954301 ~ 6958603 (+)
CI01000016_06890651_06904100 NA coding upstream 425132 6890146 ~ 6904634 (+)
CI01000016_06813604_06813789 NA coding upstream 515829 6809807 ~ 6814285 (+)
CI01000016_07445055_07456795 SLC6A19B coding downstream 114044 7445055 ~ 7457431 (+)
CI01000016_07463735_07471367 NA coding downstream 132724 7463735 ~ 7471828 (+)
CI01000016_07484583_07551063 NA coding downstream 153572 7484583 ~ 7551063 (+)
CI01000016_07711605_07715888 SP8, SP8B coding downstream 380594 7711605 ~ 7716261 (+)
CI01000016_07743396_07746536 MACC1 coding downstream 412077 7743088 ~ 7747383 (+)
G96283 NA non-coding upstream 17888 7310044 ~ 7311878 (+)
G96415 NA non-coding upstream 43166 7285071 ~ 7286600 (+)
G96414 NA non-coding upstream 65172 7263718 ~ 7264594 (+)
G96276 NA non-coding upstream 87480 7235167 ~ 7242286 (+)
G96518 NA non-coding downstream 223199 7554210 ~ 7554540 (+)
G97724 NA non-coding downstream 321031 7652042 ~ 7652353 (+)
G97760 NA non-coding downstream 440627 7771638 ~ 7771965 (+)
G97764 NA non-coding downstream 447060 7778071 ~ 7778392 (+)
G97745 NA non-coding downstream 494377 7825388 ~ 7827695 (+)
G96389 NA other upstream 168476 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 1921903 5405791 ~ 5407963 (+)
G95792 NA other upstream 2103825 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 2493111 4829592 ~ 4837457 (+)
G95648 NA other upstream 3055861 4272636 ~ 4273905 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 453054 7783987 ~ 7784996 (+)
G97824 NA other downstream 683352 8014363 ~ 8015775 (+)
G98288 NA other downstream 1665087 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 2464620 9795950 ~ 9842576 (+)
G99041 NA other downstream 2593407 9924418 ~ 9925654 (+)

Expression


Co-expression Network