G97745


Basic Information

Item Value
gene id G97745
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 7825388 ~ 7827695 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU111232
AAAGGTGATCTGTGACAGAAGGGAACGCGTATGGTTACAAACTAAATGTGACATTCTATCGCTAGCGGACAGTTCTCATTAACATCCAGTGGAACAGACAACAGGAATGAAACAGGCCAGCTCAGGTTGACTCACAGGCTATTTGTAGACATAGTGATGGCTCACATCAATTAAACATGTTTTCCTCTTTAACTTGTTTTTTGTTGTTTTTCAGAGGATCTCATTCACAAAAAAATAACTTTACACCAGAAGCTTGAAATGAAAAAAAAAAGGGAATACAGGAAAGATGAATCGCTAACAAAAAATGACAATAGTACATTTCTTGATCACGCAAGTTGATCTGAGCACTTCATGAAGAAAGACGGCCAACGAATGGCAACACTGCCTCAGGAAAGAACAGAACGATTACCTTTTTTTTTCTACAGAAGAAACATCAAGCCTGCGTGTCGTGTAAATCAGAGCTCACTGCTGGGCCCTCTGACTTCAGCATGGAGTTGTCCTCTCCCAGCATTCCTGCGCTCATGAATCATTCTGATTCCTGGCTTCCACCAGGCATTTCCTCTACAACGCTCTCCCTCTGAAAAGGAGCAGAGTGCTGCTCACGATCCCGGGCAGCCTTCAGTTTGGGCCACAGGAGAACAAGGAACACAGAATGTCATTCTAGAGCTTTCCAGATTTCATTCCAACTGTTAAAGGAATATTCAATGCAAGTTAGGCATAACTTGTATTGAACTTGGAATATTCCTTTAATTTTGTTGTTGTGTGGATTTTCATGTTTACCGACTTTGTTCCCAGACCATCTGGAAGTCTTTCAGCAAAAAAAATCGTACTCTTACATACTGTAATATATCTTTAAAATAACATTCATATAAAGCAAAGTAAGATCTATAAGAAATCCATAGTGCCATGGGAAAATCACAGAAATATCCTAGAAGAGCTTTGAGTTGCTGTTTCTCAAAGGGTGGATAGAAAGTAGAAAGAATTTCTTAAATTATTATTTCAACAAACAATCAAAAACTGCTTCTTAGCATTTAAAAGACCAAAGTCGGCTAAATTCTCATCTTATTCAATTATATACAAAACATACAACGTACAATACACAGACCACTTCACAAGTTCACGAATGAGACCAGTTCCGAAGCTCCCAAAGCAATGTAAGCATGTCGCGTGTATGTCAGCCTGTGCCTTCGTGTGCAAGTGTGAAGATGTATCTGTCATTTCATATCATGGCGTGTATCACCACCCTCCCGTTAACCTGGTGAATGTAGGAGCTCTGCTTGTCAGCCAGGCTCTGAGTGGCCATTGTCTCATCATCGCTGGCATCGGGCTCCTCTTTGATCCGGATGACCCCAGGGTGAGTGTCCAGTGGCTCAATGGGTGAACCGGAGCTGCGGTTACTGTCGGGGCTGTGCTTCCTGATGACGCCACCAGAGGGCGAGCTGTCCTCCTGCATGGCATGGTCATGAAAATCCTCTCCCTCTTCCTCCTCTGACTCCTGCAAGTGGACGTTCGGCTGACGAAGCTGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111232 True 1528 lncRNA 0.43 3 7825388 7827695

Neighbor

gene id symbol gene type direction distance location
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S coding upstream 40392 7783987 ~ 7784996 (+)
CI01000016_07759095_07759370 NA coding upstream 64114 7759095 ~ 7761274 (+)
CI01000016_07743396_07746536 MACC1 coding upstream 78005 7743088 ~ 7747383 (+)
CI01000016_07711605_07715888 SP8, SP8B coding upstream 109127 7711605 ~ 7716261 (+)
CI01000016_07484583_07551063 NA coding upstream 274325 7484583 ~ 7551063 (+)
CI01000016_07851297_07854401 NA coding downstream 23061 7850756 ~ 7854610 (+)
CI01000016_07937188_07955977 ANKRD44, ANKRD28B, ANKRD28 coding downstream 109493 7937188 ~ 7956457 (+)
CI01000016_07956184_07965721 C16H2ORF66 coding downstream 128376 7956071 ~ 7965940 (+)
CI01000016_07969424_07983149 HACL1 coding downstream 140633 7968328 ~ 7983566 (+)
CI01000016_07998560_08008403 COLQ coding downstream 170865 7998560 ~ 8008446 (+)
G97764 NA non-coding upstream 46996 7778071 ~ 7778392 (+)
G97760 NA non-coding upstream 53423 7771638 ~ 7771965 (+)
G97724 NA non-coding upstream 173035 7652042 ~ 7652353 (+)
G96518 NA non-coding upstream 270848 7554210 ~ 7554540 (+)
G96453 NA non-coding upstream 494377 7329766 ~ 7331011 (+)
G97746 NA non-coding downstream 18221 7845916 ~ 7847529 (+)
G97747 NA non-coding downstream 19962 7847657 ~ 7859181 (+)
G97788 NA non-coding downstream 78529 7906224 ~ 7906558 (+)
G96389 NA other upstream 664098 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 2417525 5405791 ~ 5407963 (+)
G95792 NA other upstream 2599447 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 2988733 4829592 ~ 4837457 (+)
G97824 NA other downstream 186668 8014363 ~ 8015775 (+)
G98288 NA other downstream 1168403 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 1967936 9795950 ~ 9842576 (+)
G99041 NA other downstream 2096723 9924418 ~ 9925654 (+)
G99410 NA other downstream 2406705 10234400 ~ 10236851 (+)

Expression


Co-expression Network