G97788


Basic Information

Item Value
gene id G97788
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 7906224 ~ 7906558 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU111284
CTGCTGTCCAAAAGCTTGGACAATTTCAATTTTATTCAGCAAGGATGCATTTATTCAAAAGTGACATTTATGTGACAGATTTCTGTATCAGATCAATGCTGTTTTGTGCTTTCAATTAATCAAAGAATCTTATACAAATGTATCACGGTTTCCACAAACATTTTTAAACAGCACAACTAGTCTCATATTGATAATAAGAAATGTTTCTTGAGCACCAAATCAGCATATTAGAATGATGCATATCATATCATGATCATGTGACACTGAAGACTGGAATAATGACACTGCTTTTCCATCACAGGAATATGTTAGATTTTAAAATATATTTAAAAAAG

Function

NR:

description
PREDICTED: outer dense fiber protein 3-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111284 True 335 lncRNA 0.31 1 7906224 7906558

Neighbor

gene id symbol gene type direction distance location
CI01000016_07851297_07854401 NA coding upstream 51614 7850756 ~ 7854610 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S coding upstream 121228 7783987 ~ 7784996 (+)
CI01000016_07759095_07759370 NA coding upstream 144950 7759095 ~ 7761274 (+)
CI01000016_07743396_07746536 MACC1 coding upstream 158841 7743088 ~ 7747383 (+)
CI01000016_07711605_07715888 SP8, SP8B coding upstream 189963 7711605 ~ 7716261 (+)
CI01000016_07937188_07955977 ANKRD44, ANKRD28B, ANKRD28 coding downstream 30630 7937188 ~ 7956457 (+)
CI01000016_07956184_07965721 C16H2ORF66 coding downstream 49513 7956071 ~ 7965940 (+)
CI01000016_07969424_07983149 HACL1 coding downstream 61770 7968328 ~ 7983566 (+)
CI01000016_07998560_08008403 COLQ coding downstream 92002 7998560 ~ 8008446 (+)
CI01000016_08034844_08037586 FKBP14 coding downstream 128286 8034844 ~ 8038025 (+)
G97747 NA non-coding upstream 47043 7847657 ~ 7859181 (+)
G97746 NA non-coding upstream 58695 7845916 ~ 7847529 (+)
G97745 NA non-coding upstream 78529 7825388 ~ 7827695 (+)
G97764 NA non-coding upstream 127832 7778071 ~ 7778392 (+)
G97760 NA non-coding upstream 134259 7771638 ~ 7771965 (+)
G97826 NA non-coding downstream 152411 8058969 ~ 8063310 (+)
CI01000016_08270091_08279026 HIBADH, HIBADHA, HIBADHB non-coding downstream 343830 8268720 ~ 8279924 (+)
G98151 NA non-coding downstream 436553 8343111 ~ 8343467 (+)
G96389 NA other upstream 744934 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 2498361 5405791 ~ 5407963 (+)
G95792 NA other upstream 2680283 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 3069569 4829592 ~ 4837457 (+)
G97824 NA other downstream 107805 8014363 ~ 8015775 (+)
G98288 NA other downstream 1089540 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 1889073 9795950 ~ 9842576 (+)
G99041 NA other downstream 2017860 9924418 ~ 9925654 (+)
G99410 NA other downstream 2327842 10234400 ~ 10236851 (+)

Expression


Co-expression Network