G98155


Basic Information

Item Value
gene id G98155
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8358023 ~ 8358279 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU111688
CCGAAGATGAACGAAAGTCTTACCGGTGTGGAATGACATGAGGGTGAGTAATTAATGACAGAATTTTAATTTTTGGGTGAACTAACCCTTTAAAAGTAAGAATTGGACCATAATCTAAAGTGTGACCAAAAACACTATTCATAGTTATCATGTGACGTCACACCCGAATGCCCACTAGGAGGGCAAAACAAGGCTTTCCGCCATTACCCATCAGTCATCAGTAGTAAGACCAGTACTCGAATCAAGTTATATGGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111688 True 257 lncRNA 0.40 1 8358023 8358279

Neighbor

gene id symbol gene type direction distance location
CI01000016_08323079_08336573 SKAP2 coding upstream 21336 8323079 ~ 8336687 (+)
CI01000016_08315282_08316952 HOXA2B, HOXA2 coding upstream 40845 8314973 ~ 8317178 (+)
CI01000016_08304658_08306198 HOXA9B coding upstream 51231 8302914 ~ 8306792 (+)
CI01000016_08299340_08301616 HOXA10B coding upstream 56407 8299340 ~ 8301616 (+)
CI01000016_08293872_08295500 HOXA11B, HOXA11 coding upstream 62523 8293872 ~ 8295500 (+)
CI01000016_08390421_08396972 NA coding downstream 32010 8390289 ~ 8397755 (+)
CI01000016_08450823_08453343 NA coding downstream 92349 8450628 ~ 8453377 (+)
CI01000016_08513514_08545976 OSBPL3B, OSBPL3 coding downstream 155235 8513514 ~ 8546137 (+)
CI01000016_08553934_08565167 DFNA5 coding downstream 194564 8552843 ~ 8565246 (+)
CI01000016_08628196_08630801 NA coding downstream 269917 8628196 ~ 8631378 (+)
G98152 NA non-coding upstream 11130 8346692 ~ 8346893 (+)
G98151 NA non-coding upstream 14556 8343111 ~ 8343467 (+)
CI01000016_08270091_08279026 HIBADH, HIBADHA, HIBADHB non-coding upstream 89045 8268720 ~ 8279924 (+)
G97826 NA non-coding upstream 294713 8058969 ~ 8063310 (+)
CI01000016_07969424_07983149 HACL1 non-coding upstream 374457 7968328 ~ 7983566 (+)
G98103 NA non-coding downstream 366 8358645 ~ 8374582 (+)
G98169 NA non-coding downstream 18242 8376521 ~ 8376813 (+)
G98177 NA non-coding downstream 47786 8406065 ~ 8406296 (+)
G98193 NA non-coding downstream 99670 8457949 ~ 8458166 (+)
G97824 NA other upstream 342248 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 572300 7783987 ~ 7784996 (+)
G96389 NA other upstream 1196733 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 2950160 5405791 ~ 5407963 (+)
G95792 NA other upstream 3132082 5219880 ~ 5225941 (+)
G98288 NA other downstream 637819 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 1437352 9795950 ~ 9842576 (+)
G99041 NA other downstream 1566139 9924418 ~ 9925654 (+)
G99410 NA other downstream 1876121 10234400 ~ 10236851 (+)
G99456 NA other downstream 1936112 10294391 ~ 10298904 (+)

Expression


Co-expression Network