G98169


Basic Information

Item Value
gene id G98169
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8376521 ~ 8376813 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU111702
GCCAGGGCTTAAAATTAACACTCGCCAAGCACCAAATGCGAGTAAAAAGTGTTGGCGAGTATATGAAACGGCGTCAATAGGCAGTTGGCCGGTAACATTTTTATAAATTGTAACAATGCAACATTGTGAGAGCATGAACGTGAATGACGCTTGGGACAGTTGACAGGTCTGCGCTCCATCGTCATGAAAGTTTAAGCCTTGCCAATTTAAATATTCAAGCTCAAGAAGACACAAATGGGAACTCAATTCATTACTCAAACGCTGTGTGCGAAGTTTTCTGTATGCAAACATCC

Function

NR:

description
PREDICTED: poly(A) polymerase gamma-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111702 True 293 lncRNA 0.42 1 8376521 8376813

Neighbor

gene id symbol gene type direction distance location
CI01000016_08323079_08336573 SKAP2 coding upstream 39834 8323079 ~ 8336687 (+)
CI01000016_08315282_08316952 HOXA2B, HOXA2 coding upstream 59343 8314973 ~ 8317178 (+)
CI01000016_08304658_08306198 HOXA9B coding upstream 69729 8302914 ~ 8306792 (+)
CI01000016_08299340_08301616 HOXA10B coding upstream 74905 8299340 ~ 8301616 (+)
CI01000016_08293872_08295500 HOXA11B, HOXA11 coding upstream 81021 8293872 ~ 8295500 (+)
CI01000016_08390421_08396972 NA coding downstream 13476 8390289 ~ 8397755 (+)
CI01000016_08450823_08453343 NA coding downstream 73815 8450628 ~ 8453377 (+)
CI01000016_08513514_08545976 OSBPL3B, OSBPL3 coding downstream 136701 8513514 ~ 8546137 (+)
CI01000016_08553934_08565167 DFNA5 coding downstream 176030 8552843 ~ 8565246 (+)
CI01000016_08628196_08630801 NA coding downstream 251383 8628196 ~ 8631378 (+)
G98103 NA non-coding upstream 1939 8358645 ~ 8374582 (+)
G98155 NA non-coding upstream 18242 8358023 ~ 8358279 (+)
G98152 NA non-coding upstream 29628 8346692 ~ 8346893 (+)
G98151 NA non-coding upstream 33054 8343111 ~ 8343467 (+)
CI01000016_08270091_08279026 HIBADH, HIBADHA, HIBADHB non-coding upstream 107543 8268720 ~ 8279924 (+)
G98177 NA non-coding downstream 29252 8406065 ~ 8406296 (+)
G98193 NA non-coding downstream 81136 8457949 ~ 8458166 (+)
G98195 NA non-coding downstream 82015 8458828 ~ 8459071 (+)
G98098 NA non-coding downstream 190016 8566829 ~ 8569687 (+)
G97824 NA other upstream 360746 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 590798 7783987 ~ 7784996 (+)
G96389 NA other upstream 1215231 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 2968658 5405791 ~ 5407963 (+)
G95792 NA other upstream 3150580 5219880 ~ 5225941 (+)
G98288 NA other downstream 619285 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 1418818 9795950 ~ 9842576 (+)
G99041 NA other downstream 1547605 9924418 ~ 9925654 (+)
G99410 NA other downstream 1857587 10234400 ~ 10236851 (+)
G99456 NA other downstream 1917578 10294391 ~ 10298904 (+)

Expression


Co-expression Network