Gene
RNA
| Item | Value |
|---|---|
| gene id | G98106 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 8632923 ~ 8634430 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU111636 | True | 1102 | lncRNA | 0.34 | 2 | 8632923 | 8634430 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000016_08628196_08630801 | NA | coding | upstream | 1545 | 8628196 ~ 8631378 (+) |
| CI01000016_08553934_08565167 | DFNA5 | coding | upstream | 67677 | 8552843 ~ 8565246 (+) |
| CI01000016_08513514_08545976 | OSBPL3B, OSBPL3 | coding | upstream | 86786 | 8513514 ~ 8546137 (+) |
| CI01000016_08450823_08453343 | NA | coding | upstream | 179546 | 8450628 ~ 8453377 (+) |
| CI01000016_08390421_08396972 | NA | coding | upstream | 235168 | 8390289 ~ 8397755 (+) |
| CI01000016_08675783_08684401 | KCNJ14 | coding | downstream | 38981 | 8673411 ~ 8684506 (+) |
| CI01000016_08696516_08734418 | MYH14 | coding | downstream | 62086 | 8696516 ~ 8734660 (+) |
| CI01000016_08748359_08750572 | NA | coding | downstream | 113929 | 8748359 ~ 8750736 (+) |
| CI01000016_08752386_08753821 | RPL18.L, RPL18.S, RPL18 | coding | downstream | 117956 | 8752386 ~ 8753821 (+) |
| CI01000016_08766170_08768621 | LAG3 | coding | downstream | 131740 | 8766170 ~ 8768778 (+) |
| G98225 | NA | non-coding | upstream | 14069 | 8618536 ~ 8618854 (+) |
| G98223 | NA | non-coding | upstream | 19183 | 8612964 ~ 8613740 (+) |
| G98222 | NA | non-coding | upstream | 25057 | 8607402 ~ 8607866 (+) |
| G98221 | NA | non-coding | upstream | 27483 | 8605223 ~ 8605440 (+) |
| G98220 | NA | non-coding | upstream | 28111 | 8604598 ~ 8604812 (+) |
| G98230 | NA | non-coding | downstream | 7758 | 8642188 ~ 8642410 (+) |
| G98231 | NA | non-coding | downstream | 8331 | 8642761 ~ 8642978 (+) |
| G98294 | NA | non-coding | downstream | 21332 | 8655762 ~ 8656133 (+) |
| G98307 | NA | non-coding | downstream | 37328 | 8671758 ~ 8689219 (+) |
| G98315 | NA | non-coding | downstream | 128283 | 8762713 ~ 8762969 (+) |
| G97824 | NA | other | upstream | 617148 | 8014363 ~ 8015775 (+) |
| CI01000016_07784248_07784757 | TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S | other | upstream | 847200 | 7783987 ~ 7784996 (+) |
| G96389 | NA | other | upstream | 1471633 | 7160641 ~ 7161290 (+) |
| CI01000016_05405791_05407797 | AICDA | other | upstream | 3225060 | 5405791 ~ 5407963 (+) |
| G95792 | NA | other | upstream | 3406982 | 5219880 ~ 5225941 (+) |
| G98288 | NA | other | downstream | 361668 | 8996098 ~ 9002717 (+) |
| CI01000016_09796196_09842235 | NA | other | downstream | 1161201 | 9795950 ~ 9842576 (+) |
| G99041 | NA | other | downstream | 1289988 | 9924418 ~ 9925654 (+) |
| G99410 | NA | other | downstream | 1599970 | 10234400 ~ 10236851 (+) |
| G99456 | NA | other | downstream | 1659961 | 10294391 ~ 10298904 (+) |
