G98294


Basic Information

Item Value
gene id G98294
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8655762 ~ 8656133 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU111828
CATGTCTTACCCCATTTTGCGACATGGCTGCAATTGTTCATGCTAGGAAAAGACACTGGAGAGAAGCGCGTGGTAGAAGGGAGAAAATATTTTCCACTCGTATTAATGTCTTTGGAATGCCAGAGGAAGATGTTATCCGTATATTACATGTAACAAGTTGCGTCTGTGTCGACCCGCACCTGATGAGCATCAGCTCTGCTTATTTGCGACCCAACGCTAATTTGCACTGCTCTTAGTAGATTGTGTTGGTCATTATGTAAATGATTTGACTGCGTCTGTGTTCTTTAATTTGCGCGTCAGCAGTAGATCACACGCAAAACTTGTCACTCCCATCGGCGCATTTGTGGAATTGCGCTCTCACGCTAATTTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111828 True 372 lncRNA 0.44 1 8655762 8656133

Neighbor

gene id symbol gene type direction distance location
CI01000016_08628196_08630801 NA coding upstream 24384 8628196 ~ 8631378 (+)
CI01000016_08553934_08565167 DFNA5 coding upstream 90516 8552843 ~ 8565246 (+)
CI01000016_08513514_08545976 OSBPL3B, OSBPL3 coding upstream 109625 8513514 ~ 8546137 (+)
CI01000016_08450823_08453343 NA coding upstream 202385 8450628 ~ 8453377 (+)
CI01000016_08390421_08396972 NA coding upstream 258007 8390289 ~ 8397755 (+)
CI01000016_08675783_08684401 KCNJ14 coding downstream 17278 8673411 ~ 8684506 (+)
CI01000016_08696516_08734418 MYH14 coding downstream 40383 8696516 ~ 8734660 (+)
CI01000016_08748359_08750572 NA coding downstream 92226 8748359 ~ 8750736 (+)
CI01000016_08752386_08753821 RPL18.L, RPL18.S, RPL18 coding downstream 96253 8752386 ~ 8753821 (+)
CI01000016_08766170_08768621 LAG3 coding downstream 110037 8766170 ~ 8768778 (+)
G98231 NA non-coding upstream 12784 8642761 ~ 8642978 (+)
G98230 NA non-coding upstream 13352 8642188 ~ 8642410 (+)
G98106 NA non-coding upstream 21332 8632923 ~ 8634430 (+)
G98225 NA non-coding upstream 36908 8618536 ~ 8618854 (+)
G98223 NA non-coding upstream 42022 8612964 ~ 8613740 (+)
G98307 NA non-coding downstream 15625 8671758 ~ 8689219 (+)
G98315 NA non-coding downstream 106580 8762713 ~ 8762969 (+)
G98320 NA non-coding downstream 122410 8778543 ~ 8778763 (+)
G98321 NA non-coding downstream 124434 8780567 ~ 8780906 (+)
G98256 NA non-coding downstream 127480 8783613 ~ 8800681 (+)
G97824 NA other upstream 639987 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 870039 7783987 ~ 7784996 (+)
G96389 NA other upstream 1494472 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 3247899 5405791 ~ 5407963 (+)
G95792 NA other upstream 3429821 5219880 ~ 5225941 (+)
G98288 NA other downstream 339965 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 1139498 9795950 ~ 9842576 (+)
G99041 NA other downstream 1268285 9924418 ~ 9925654 (+)
G99410 NA other downstream 1578267 10234400 ~ 10236851 (+)
G99456 NA other downstream 1638258 10294391 ~ 10298904 (+)

Expression


Co-expression Network