G98256


Basic Information

Item Value
gene id G98256
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8783613 ~ 8800681 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU111790
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTCTTCAAAATATAAAGTTTATTTTTGGAAGATATGTGTGTGTGTGTGTGTGTGTATGTACATCATTTTATACCATTTGTATACAAAAAGTCACCATATTTGTAATTCTACAATTGTCCATTTAAAAAGAAAAAGTGCATATCGGTGGGTATTAAAAAAAATAAAATTCATTTTTGGGACATTAAGTTTGTTCTAAGCAAAAATAAATGCTTCTAATTGGCTCATGATATCTGAATGCACAGAGATTAGCTTGCATATTATATTACACATTTCTAAAGAGAAAGAATGGAAAGTAAAAGTATAAAAACCCAAGTCTGCTGTTATGGAAACAAGATGAAAAGGAGATTAAAATTTTATGACTGTAGCAAGGGTCATGCTTTCCAGGTTAATAAAAGTTCAATTAAAAAAAACAGAGCTGCCTAGGGGACATGAGCCAAATATGTGTGCAATAACACTTAAAAAAAATCTGCTGGACAGAAGGACAGAACATTTTAAAGACATTAAAGCAACATTTAAACACTGAAAAGCAGAAAAAGCTAAATTTATCCATTAGCATATTCAGCTAACAAATCTACAAGATTTACCTTGAAAGCTTGATACAAATAATCTGTGGTCAAATCAGCTTTATATTGGCACATGCACATATTAATGCTATTATTTTTGCTGAAGCACCATATTAAAATCCCATGAGAAAGCTGTGGAATGATACACAGAAAACATATGGCAATACAAATGCAATTAAAGAGAGCTTTTGGTTCAAAAATACCTCTAGTTTAACGTTAATTCTATACAGCTGAAGGCATTATTAGGTATATGTGACCCGGGACTACTAAACCAGTCATAAGGGTCAATTTTTTGAAATTGAGATTTATACATCATCTGAAAGTTGAATAAATAATCTTTCCGTTGATGTATGGTTTGTTAGGATAGGACAATATTTGGCTGAGATACAACTGAATCTGAGCGTGCAAAAAAATCAAAATACTGAGAAAATTGCCTTCAAAGTTGTCCAAATGAAGACCTTAGCAATGCATATTCACTCATTTTTGATATATTTACGGTAGGAAATGTACAAAATATCTTCATGGAACATGATCCTTACTTAATATCTTAATTATTGCTGGCATAAAAGAAAAATCGATAATTTTGACCCATACAGTGTATTGTTGGCTATTGCTACAAATATAGCCGTGCGACTTATGAATGATTTTGTGGTCCAGGGTCACATATCTCACAAAACACATCAAGAACATGATCAGGTCACATTTTACCACCCAAAAAAGTTAAAATAAACTTCCTGATTTCTTAAAGTAATACTGAAGACTGGAGAAATGGCTGCTAAAAATCGTAAGAAAGAATAAAATGTTCAACTATATAAAAAATTAAAATGGTTACGTTAAATTTAAAAGTAATACTTCACATTATTATTGTTTTCACAATAATTTGATCAAATAAATGCAGCCTTAGGGAACATAATCTTCTTTCAAAAAAGATTGTCTTTTCATAAAAAACCTTATTGATCTCCAGCTTTTGAACAGTAGTGTATATATTTTTTATGGTGAAATGTGAACTGGACATGTTTTTGTGAGTTTTGTGCTATTATAAGGAGAACTGGCAGAGAATATCCATGATTATGTCATCTCCATTAAATTTGTAAAAAATGACAACCCAAACCCCAACCACCCCACCACCCTTGTTCATATATATATATATATATATAAACTTTAACTGCACCAGAAAAAGCCTTGATGAAATATTTACACACAACACTACATACATACTACAAGAATATATGCATGTTCATAAAACATTTTTAGTGTGAAATCTTCAGACAACTGGAAATATGGCATGGTGTTATCCAGTAATACAGCTGTAGATGCACTTCCACTTTCAAAGGAATCCAATGGAATTTAGTGGAAGGTTAAGATCTCTATTAATGCCCTGTTCTCCATTCTTTTCCAATGGAATCATTATGGAGCGCTTGTGTCCTGCGAAAGGAACCTGTTCTCGATGTTGTCCGCACAGTTAACCAAATACATGTCCCTCAATGTTTCGATGAACATCTGGATGCGGTGACATGGCAAAACATTGTTCCCTCCTCCACTGCCACTGTCACTCCAAACCTTCAGCATCTGGTATTGGGCATCCTTGTACTTCCGGTTGTCTTGTTCTGCCCTTTCAATGTTCTGCTCAGAAACGCCAAGCTGACGTACCAGTTCTTTAAATCGTCCGACAGGGACCTCGTCCAGCACAAAATAGAAGAATTCATGAACTACAAGAGACAGAAATGGG

Function

NR:

description
PREDICTED: titin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111790 True 2329 lncRNA 0.33 2 8783613 8800681

Neighbor

gene id symbol gene type direction distance location
CI01000016_08766170_08768621 LAG3 coding upstream 14835 8766170 ~ 8768778 (+)
CI01000016_08752386_08753821 RPL18.L, RPL18.S, RPL18 coding upstream 29792 8752386 ~ 8753821 (+)
CI01000016_08748359_08750572 NA coding upstream 32877 8748359 ~ 8750736 (+)
CI01000016_08696516_08734418 MYH14 coding upstream 48953 8696516 ~ 8734660 (+)
CI01000016_08675783_08684401 KCNJ14 coding upstream 99107 8673411 ~ 8684506 (+)
CI01000016_08817749_08824067 NA coding downstream 17068 8817749 ~ 8824078 (+)
CI01000016_08916022_08916606 NA coding downstream 114347 8915028 ~ 8916667 (+)
CI01000016_09026732_09050431 NA coding downstream 226051 9026732 ~ 9050838 (+)
CI01000016_09138227_09156795 NA coding downstream 336753 9137434 ~ 9157472 (+)
CI01000016_09181426_09182326 NA coding downstream 380745 9181426 ~ 9182326 (+)
G98321 NA non-coding upstream 2707 8780567 ~ 8780906 (+)
G98320 NA non-coding upstream 4850 8778543 ~ 8778763 (+)
G98315 NA non-coding upstream 20644 8762713 ~ 8762969 (+)
G98307 NA non-coding upstream 94394 8671758 ~ 8689219 (+)
G98294 NA non-coding upstream 127480 8655762 ~ 8656133 (+)
G98317 NA non-coding downstream 14955 8815636 ~ 8816240 (+)
G98318 NA non-coding downstream 15733 8816414 ~ 8816982 (+)
G98326 NA non-coding downstream 44973 8845654 ~ 8847124 (+)
G98241 NA non-coding downstream 80328 8881009 ~ 8912783 (+)
G98272 NA non-coding downstream 89161 8889842 ~ 8894794 (+)
G97824 NA other upstream 767838 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 997890 7783987 ~ 7784996 (+)
G96389 NA other upstream 1622323 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 3375750 5405791 ~ 5407963 (+)
G95792 NA other upstream 3557672 5219880 ~ 5225941 (+)
G98288 NA other downstream 195417 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 994950 9795950 ~ 9842576 (+)
G99041 NA other downstream 1123737 9924418 ~ 9925654 (+)
G99410 NA other downstream 1433719 10234400 ~ 10236851 (+)
G99456 NA other downstream 1493710 10294391 ~ 10298904 (+)

Expression


Co-expression Network