G98317


Basic Information

Item Value
gene id G98317
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8815636 ~ 8816240 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU111852
TAGATTGTAATAGAGTTGTGTCTCCTGAAAGAATAAAACTGATCAAAATCATAAAATGCCTCTTTTTTTGTTTATTATAGCGCAGACAAAATACATTGTAGACATTGTATCTGATATGAATAAAACACTGTCAAATTATAATTGTAAGGATTATTGCAGCTTCCATATCAGTGTATAGAATTTGCATTTAACAAACTGTAAGTGTCTTTTTTATATATAGCCTAGTAATTCATTTAAATGTCTATTTAAATGTCTGAAACCTCAAATAAACATTATGGGGTTGAAAACACTGAATAGTTAGTGAAATATAAAAAGCTCTGAGCGAGTCTTTCTCTGGCTCAGCGCCAGCACCGCTGTGTAACCGTATGCGTCAAAGCATTAAAATCGATTGCGTTTCGGGGATGAAGGGAGGATAAATTGAAACTGAGGGGGCACAAATCAGATGCCCCCTTTTGGCAATGCCTGAACTCAACTTACGGAAAAAATGTAACTGGCGCTGCGTTTGTTCTGTAAGTTGAATAGGGAAGGCGTAGGACATACAGCGTAAGCTTTTTGGAGAATACAGAAATGCGGTTTTGGCGGAGGCATTTAGAAGGCGAACGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111852 True 605 lncRNA 0.37 1 8815636 8816240

Neighbor

gene id symbol gene type direction distance location
CI01000016_08766170_08768621 LAG3 coding upstream 46858 8766170 ~ 8768778 (+)
CI01000016_08752386_08753821 RPL18.L, RPL18.S, RPL18 coding upstream 61815 8752386 ~ 8753821 (+)
CI01000016_08748359_08750572 NA coding upstream 64900 8748359 ~ 8750736 (+)
CI01000016_08696516_08734418 MYH14 coding upstream 80976 8696516 ~ 8734660 (+)
CI01000016_08675783_08684401 KCNJ14 coding upstream 131130 8673411 ~ 8684506 (+)
CI01000016_08817749_08824067 NA coding downstream 1509 8817749 ~ 8824078 (+)
CI01000016_08916022_08916606 NA coding downstream 98788 8915028 ~ 8916667 (+)
CI01000016_09026732_09050431 NA coding downstream 210492 9026732 ~ 9050838 (+)
CI01000016_09138227_09156795 NA coding downstream 321194 9137434 ~ 9157472 (+)
CI01000016_09181426_09182326 NA coding downstream 365186 9181426 ~ 9182326 (+)
G98256 NA non-coding upstream 14955 8783613 ~ 8800681 (+)
G98321 NA non-coding upstream 34730 8780567 ~ 8780906 (+)
G98320 NA non-coding upstream 36873 8778543 ~ 8778763 (+)
G98315 NA non-coding upstream 52667 8762713 ~ 8762969 (+)
G98307 NA non-coding upstream 126417 8671758 ~ 8689219 (+)
G98318 NA non-coding downstream 174 8816414 ~ 8816982 (+)
G98326 NA non-coding downstream 29414 8845654 ~ 8847124 (+)
G98241 NA non-coding downstream 64769 8881009 ~ 8912783 (+)
G98272 NA non-coding downstream 73602 8889842 ~ 8894794 (+)
G98289 NA non-coding downstream 126977 8943217 ~ 8945455 (+)
G97824 NA other upstream 799861 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1029913 7783987 ~ 7784996 (+)
G96389 NA other upstream 1654346 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 3407773 5405791 ~ 5407963 (+)
G95792 NA other upstream 3589695 5219880 ~ 5225941 (+)
G98288 NA other downstream 179858 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 979391 9795950 ~ 9842576 (+)
G99041 NA other downstream 1108178 9924418 ~ 9925654 (+)
G99410 NA other downstream 1418160 10234400 ~ 10236851 (+)
G99456 NA other downstream 1478151 10294391 ~ 10298904 (+)

Expression


Co-expression Network