G98672


Basic Information

Item Value
gene id G98672
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8915922 ~ 8916673 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU112289
TTTTATTAACCAGAAAGCATATATTTACACGACGCAGTCTGTACATCCTCAGAAATCAAGCAGTCTTTCAAGAGCCATCGTCCCCTTCTTGTATAGCAGTCAGTACAGAAGAGCTGCTGGCGTTCATCGTCTCCTCAGTGGAGTTGTCCAAAAGCGTGGCTCCCGCGTCAGTCTCAGTCTCTTCCATTTCATCCGCCGATTCGTCGCTCATCTCTGGATCATCGCAATCTTTAGGTTCATCTAGCACCGATTTCTCTGTGTCTATCGGATCCAGGTAGTGACAAACTGCACTCTTCCGGCCGAACGACTCTTCATCGTGGAGAGCCAGTACCTCTATTCGGTTAGAGACGGGCTCGTCCTCTTTCCTCTCGGACAGAAACGTCCGCTGCAGCATCAGTTTCTTCATGGTGTGACATTTGTATTTAAGGGCTGGTTTAGAGTCTGCACCATCTTCTTCGAAAATCACACATGTTCCGATGGCGTCCTCGTATTCTCCAGCGAACAGATACCGGCCCACCTGCATCATGGGCTGCTCGCTGTCAATGTCCACTATCTTACAGGTGCTCTGCCGACTGGAGAGTAGATCAGAGCTGATCATTCCAGACAGTTCCGCCACAACCAACTGCTCCTCCTCCTCCCATTCGTCCTCCATGGCAGTGACTGAAGGGGTAGTTGTATTCATGCAAATTCCGAGAAATTTTAGTTTTAATTTACGAAAGTTGAAGCTCTCCGACAACTTCAAGTAGCGAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112289 True 752 lncRNA 0.49 1 8915922 8916673

Neighbor

gene id symbol gene type direction distance location
CI01000016_08906943_08914821 NOP2 coding downstream 982 8906612 ~ 8914940 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 coding downstream 21229 8888833 ~ 8894737 (-)
CI01000016_08881761_08888177 GAPDH coding downstream 27685 8881551 ~ 8888237 (-)
CI01000016_08871984_08874796 OPN9 coding downstream 41126 8871984 ~ 8874796 (-)
CI01000016_08851218_08869647 IFFO1B coding downstream 46275 8850872 ~ 8869647 (-)
CI01000016_08920718_08923668 EMG1 coding upstream 3792 8920465 ~ 8924048 (-)
CI01000016_08926089_08945071 NA coding upstream 9287 8925960 ~ 8945229 (-)
CI01000016_08947581_08961131 ZYX coding upstream 29475 8946148 ~ 8961131 (-)
CI01000016_09060801_09086358 CLCN1B coding upstream 143849 9060522 ~ 9088199 (-)
CI01000016_09107780_09122244 CASP2 coding upstream 190736 9107409 ~ 9122290 (-)
G98715 NA non-coding downstream 44406 8871275 ~ 8871516 (-)
G98709 NA non-coding downstream 99033 8816414 ~ 8816889 (-)
G98708 NA non-coding downstream 100221 8814845 ~ 8815701 (-)
G98714 NA non-coding downstream 104690 8810429 ~ 8811232 (-)
G98713 NA non-coding downstream 106930 8808550 ~ 8808992 (-)
G98658 NA non-coding upstream 7837 8924510 ~ 8925768 (-)
G98694 NA non-coding upstream 141139 9057812 ~ 9058118 (-)
G98776 NA non-coding upstream 184928 9101601 ~ 9101813 (-)
G98778 NA non-coding upstream 186550 9103223 ~ 9103458 (-)
G98675 NA non-coding upstream 188721 9105394 ~ 9107226 (-)
G97341 NA other downstream 2756201 6158986 ~ 6159721 (-)
CI01000016_05412782_05415867 NA other downstream 3497705 5412248 ~ 5415906 (-)
CI01000016_05325805_05330265 COX6B2 other downstream 3585076 5325519 ~ 5332874 (-)
CI01000016_04921091_04922518 NA other downstream 3992518 4918975 ~ 4922518 (-)
G98679 NA other upstream 318323 9234996 ~ 9239929 (-)
G98691 NA other upstream 339429 9256102 ~ 9257611 (-)
CI01000016_09510177_09512196 ID4 other upstream 592949 9509622 ~ 9512428 (-)
G99178 NA other upstream 897688 9814361 ~ 9814955 (-)

Expression


Co-expression Network