G98658


Basic Information

Item Value
gene id G98658
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8924510 ~ 8925768 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU112275
ACATACAGCCATTATTGTCCAAATAACTGGCAACAAAAGTGAGTACACCCTAAGTGAACATGTCAAAACTGTCCAAAGTGTCAATATTTTGTGTGAGCACCATTGATATTTAGCACTGCCTTGATCCTCTTGGGCATGGAATTCACCAGAGTTGTTGCTGGGATCCTCTTCCACTCCTCCATAACATCACGGAGCTGCTGGATGTTAGACACGTGGTGCTTCTCCACCTTCCGCTTGAGGATGCCCCACAGGTGCTTAATAGGGTTCAGGTCTGGAGACATACTTGGCCACTCCATCACCTTCACCTTCAGCTTCCTCAGCAAGGCAGTTGGCATCTTGGCGGTGTGTTTGGGGTCATTATCATGCCGTTCGGCCCAGTTTCTGCAGGGAGCATCATGTTCTGCTTCAGAATGTCACAGTATATGTTGGAATCCATGTTTCCCTCAATGACGCGCAGCTCCCCAGTACCAGCAGCAATCATGCAGCCCCAGACCATGATGCTACCACCACCATGCTTGACTGTAGACAAGACACAATTTTCTTGGTACTCCTCACCAGGGCGTCGCCACACATGCTGGATACCATCTGAGCCAAACAAGTTTATCTTGGTCTCATCAGACCACAGGACATGGTTCCAGTAATTCATGCTCTTGGAGAGGTTGTCTTCAGCAAACTGTTTACGGGCTTTCTTGTGAGCCAGCTTCAGAAGAGGCTTCTTTCTGGGACGACGGCCATGCAAACCAACTTATTGCAGTGTGTGGCGTATGGTCAATGCTGGCAGCACTCATGCATCTGTTTTTTGAAGCCAGCTTCTGCACCTGACGCACAGCACAAGGTCTCAACTTCTTTGATTCAACTTCTTTGGCCTGTTCCGTGTAGAACCCATCTTGGAAAACCTCTCTCTATGACCCTGGCCACTGTGCTGTAACTCAGTTTCATGGTGTTACCGATCTTCTTATAGCCTACGCCATCTTTGTGGAGAGCAACAATTCTAATTCTCAAATCCTCAGAGAGTTCTTTGCCATGAGGTGCCATGTTGAACATTCAGTGATCAGTATGAGAGAATTGTACTCAAAGTACCAAATTTTAACTGCTAATACAAGATCCACACATTTGCATGGTCCTGTCAAGCAGACAAAAACATGAACATGATGAATAGGACATGTGGCTTTGCATGGTTAAACGACATGCACCTGTTATCACTTAGGGTGTACTTATGTTTGTTGCCAGCTATTTTGACAGTAATGGCTGTATGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112275 True 1259 lncRNA 0.46 1 8924510 8925768

Neighbor

gene id symbol gene type direction distance location
CI01000016_08920718_08923668 EMG1 coding downstream 462 8920465 ~ 8924048 (-)
CI01000016_08906943_08914821 NOP2 coding downstream 9570 8906612 ~ 8914940 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 coding downstream 29817 8888833 ~ 8894737 (-)
CI01000016_08881761_08888177 GAPDH coding downstream 36273 8881551 ~ 8888237 (-)
CI01000016_08871984_08874796 OPN9 coding downstream 49714 8871984 ~ 8874796 (-)
CI01000016_08926089_08945071 NA coding upstream 192 8925960 ~ 8945229 (-)
CI01000016_08947581_08961131 ZYX coding upstream 20380 8946148 ~ 8961131 (-)
CI01000016_09060801_09086358 CLCN1B coding upstream 134754 9060522 ~ 9088199 (-)
CI01000016_09107780_09122244 CASP2 coding upstream 181641 9107409 ~ 9122290 (-)
CI01000016_09129190_09132103 NA coding upstream 201840 9127608 ~ 9132103 (-)
G98672 NA non-coding downstream 7837 8915922 ~ 8916673 (-)
G98715 NA non-coding downstream 52994 8871275 ~ 8871516 (-)
G98709 NA non-coding downstream 107621 8816414 ~ 8816889 (-)
G98708 NA non-coding downstream 108809 8814845 ~ 8815701 (-)
G98714 NA non-coding downstream 113278 8810429 ~ 8811232 (-)
G98694 NA non-coding upstream 132044 9057812 ~ 9058118 (-)
G98776 NA non-coding upstream 175833 9101601 ~ 9101813 (-)
G98778 NA non-coding upstream 177455 9103223 ~ 9103458 (-)
G98675 NA non-coding upstream 179626 9105394 ~ 9107226 (-)
G98666 NA non-coding upstream 230901 9156669 ~ 9158272 (-)
G97341 NA other downstream 2764789 6158986 ~ 6159721 (-)
CI01000016_05412782_05415867 NA other downstream 3506293 5412248 ~ 5415906 (-)
CI01000016_05325805_05330265 COX6B2 other downstream 3593664 5325519 ~ 5332874 (-)
CI01000016_04921091_04922518 NA other downstream 4001106 4918975 ~ 4922518 (-)
G98679 NA other upstream 309228 9234996 ~ 9239929 (-)
G98691 NA other upstream 330334 9256102 ~ 9257611 (-)
CI01000016_09510177_09512196 ID4 other upstream 583854 9509622 ~ 9512428 (-)
G99178 NA other upstream 888593 9814361 ~ 9814955 (-)

Expression


Co-expression Network