Gene
RNA
| Item | Value |
|---|---|
| gene id | G98391 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 9175199 ~ 9175960 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU111939 | False | 762 | lncRNA | 0.29 | 1 | 9175199 | 9175960 |
| TU111936 | False | 529 | lncRNA | 0.30 | 1 | 9175432 | 9175960 |
| TU111937 | True | 481 | lncRNA | 0.30 | 1 | 9175432 | 9175912 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000016_09138227_09156795 | NA | coding | upstream | 17727 | 9137434 ~ 9157472 (+) |
| CI01000016_09026732_09050431 | NA | coding | upstream | 124361 | 9026732 ~ 9050838 (+) |
| CI01000016_08916022_08916606 | NA | coding | upstream | 258532 | 8915028 ~ 8916667 (+) |
| CI01000016_08817749_08824067 | NA | coding | upstream | 351121 | 8817749 ~ 8824078 (+) |
| CI01000016_08766170_08768621 | LAG3 | coding | upstream | 406421 | 8766170 ~ 8768778 (+) |
| CI01000016_09181426_09182326 | NA | coding | downstream | 5466 | 9181426 ~ 9182326 (+) |
| CI01000016_09183871_09184200 | TMEM238 | coding | downstream | 7416 | 9183376 ~ 9184427 (+) |
| CI01000016_09228083_09231481 | NA | coding | downstream | 52123 | 9228083 ~ 9231635 (+) |
| CI01000016_09240403_09243601 | NA | coding | downstream | 63785 | 9239745 ~ 9243601 (+) |
| CI01000016_09259876_09260073 | NA | coding | downstream | 83681 | 9259641 ~ 9260201 (+) |
| G98385 | NA | non-coding | upstream | 49268 | 9125719 ~ 9125931 (+) |
| G98375 | NA | non-coding | upstream | 77096 | 9085228 ~ 9098103 (+) |
| G98362 | NA | non-coding | upstream | 185738 | 8989238 ~ 8989461 (+) |
| G98356 | NA | non-coding | upstream | 196659 | 8978232 ~ 8978540 (+) |
| G98289 | NA | non-coding | upstream | 229744 | 8943217 ~ 8945455 (+) |
| G98392 | NA | non-coding | downstream | 35390 | 9211350 ~ 9211766 (+) |
| G98280 | NA | non-coding | downstream | 48489 | 9224449 ~ 9226908 (+) |
| G98290 | NA | non-coding | downstream | 150414 | 9326374 ~ 9375553 (+) |
| G98271 | NA | non-coding | downstream | 200257 | 9376217 ~ 9378050 (+) |
| G98409 | NA | non-coding | downstream | 223995 | 9399955 ~ 9402046 (+) |
| G98288 | NA | other | upstream | 172482 | 8996098 ~ 9002717 (+) |
| G97824 | NA | other | upstream | 1159424 | 8014363 ~ 8015775 (+) |
| CI01000016_07784248_07784757 | TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S | other | upstream | 1389476 | 7783987 ~ 7784996 (+) |
| G96389 | NA | other | upstream | 2013909 | 7160641 ~ 7161290 (+) |
| CI01000016_05405791_05407797 | AICDA | other | upstream | 3767336 | 5405791 ~ 5407963 (+) |
| CI01000016_09796196_09842235 | NA | other | downstream | 619671 | 9795950 ~ 9842576 (+) |
| G99041 | NA | other | downstream | 748458 | 9924418 ~ 9925654 (+) |
| G99410 | NA | other | downstream | 1058440 | 10234400 ~ 10236851 (+) |
| G99456 | NA | other | downstream | 1118431 | 10294391 ~ 10298904 (+) |
| G99940 | NA | other | downstream | 2495685 | 11671645 ~ 11672873 (+) |
