G98392


Basic Information

Item Value
gene id G98392
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9211350 ~ 9211766 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU111940
AAAGATTCATAACGCCTCCAGTAGCTTCATGAAGCAGTGTTTTGAAATCGGCCATCACTATATAAGTCGTTATTTTGTTTTTTTGGCGCACCAAAAATATTCTCGTCACTTTATAATATTAATATTGAACCACTGTACTCGCATGAACTGATTTAAATATGTTTTTAGTACATTTATGGATTTTGAGAGAGGAAGTGTCATTGCTGGCTATGCAGGCCTCACTGAGCCATCGGATTTCAACAAAAATATCTTAATTTGCATTCCGAAGATGAATGAAGGTCTTACGGGTGTGGAACGGCATGAGGGTGAGTAATAAATTACATTATTTTCATTTTTGGGTGAACTAACCCTTTAAGTTCCAGGCATAAAACCTAAAATGTTTTTATAACCACAGCTGTCATTTTTGCTATAACCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111940 True 417 lncRNA 0.35 1 9211350 9211766

Neighbor

gene id symbol gene type direction distance location
CI01000016_09183871_09184200 TMEM238 coding upstream 26923 9183376 ~ 9184427 (+)
CI01000016_09181426_09182326 NA coding upstream 29024 9181426 ~ 9182326 (+)
CI01000016_09138227_09156795 NA coding upstream 53878 9137434 ~ 9157472 (+)
CI01000016_09026732_09050431 NA coding upstream 160512 9026732 ~ 9050838 (+)
CI01000016_08916022_08916606 NA coding upstream 294683 8915028 ~ 8916667 (+)
CI01000016_09228083_09231481 NA coding downstream 16317 9228083 ~ 9231635 (+)
CI01000016_09240403_09243601 NA coding downstream 27979 9239745 ~ 9243601 (+)
CI01000016_09259876_09260073 NA coding downstream 47875 9259641 ~ 9260201 (+)
CI01000016_09266373_09278553 NA coding downstream 53799 9265565 ~ 9279131 (+)
CI01000016_09299769_09306497 RORC coding downstream 88003 9299769 ~ 9307385 (+)
G98391 NA non-coding upstream 35390 9175199 ~ 9175960 (+)
G98385 NA non-coding upstream 85419 9125719 ~ 9125931 (+)
G98375 NA non-coding upstream 113247 9085228 ~ 9098103 (+)
G98362 NA non-coding upstream 221889 8989238 ~ 8989461 (+)
G98356 NA non-coding upstream 232810 8978232 ~ 8978540 (+)
G98280 NA non-coding downstream 12683 9224449 ~ 9226908 (+)
G98290 NA non-coding downstream 114608 9326374 ~ 9375553 (+)
G98271 NA non-coding downstream 164451 9376217 ~ 9378050 (+)
G98409 NA non-coding downstream 188189 9399955 ~ 9402046 (+)
G98414 NA non-coding downstream 192101 9403867 ~ 9404218 (+)
G98288 NA other upstream 208633 8996098 ~ 9002717 (+)
G97824 NA other upstream 1195575 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1425627 7783987 ~ 7784996 (+)
G96389 NA other upstream 2050060 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 3803487 5405791 ~ 5407963 (+)
CI01000016_09796196_09842235 NA other downstream 583865 9795950 ~ 9842576 (+)
G99041 NA other downstream 712652 9924418 ~ 9925654 (+)
G99410 NA other downstream 1022634 10234400 ~ 10236851 (+)
G99456 NA other downstream 1082625 10294391 ~ 10298904 (+)
G99940 NA other downstream 2459879 11671645 ~ 11672873 (+)

Expression


Co-expression Network