Gene
RNA
| Item | Value |
|---|---|
| gene id | G98409 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 9399955 ~ 9402046 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU111962 | True | 534 | lncRNA | 0.48 | 2 | 9399955 | 9402046 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000016_09364728_09366356 | VAMP1 | coding | upstream | 33599 | 9364649 ~ 9366356 (+) |
| CI01000016_09363759_09363932 | NA | coding | upstream | 35582 | 9363759 ~ 9364373 (+) |
| CI01000016_09357617_09361063 | PSMD4B, PSMD4, PSMD4A | coding | upstream | 38892 | 9357617 ~ 9361063 (+) |
| CI01000016_09340494_09349036 | PIP5K1A, PIP5K1AB | coding | upstream | 50919 | 9340494 ~ 9349036 (+) |
| CI01000016_09317824_09332379 | NA | coding | upstream | 67241 | 9317722 ~ 9332714 (+) |
| CI01000016_09524279_09527107 | NA | coding | downstream | 121571 | 9523617 ~ 9527207 (+) |
| CI01000016_09615039_09616082 | NA | coding | downstream | 210745 | 9612791 ~ 9617419 (+) |
| CI01000016_09663511_09664293 | NA | coding | downstream | 261465 | 9663511 ~ 9664495 (+) |
| CI01000016_09664848_09674309 | CEP192, SEH1L | coding | downstream | 262802 | 9664848 ~ 9674728 (+) |
| CI01000016_09686132_09706397 | CEP192 | coding | downstream | 284086 | 9686132 ~ 9706453 (+) |
| G98271 | NA | non-coding | upstream | 21905 | 9376217 ~ 9378050 (+) |
| G98290 | NA | non-coding | upstream | 24402 | 9326374 ~ 9375553 (+) |
| G98280 | NA | non-coding | upstream | 173047 | 9224449 ~ 9226908 (+) |
| G98392 | NA | non-coding | upstream | 188189 | 9211350 ~ 9211766 (+) |
| G98391 | NA | non-coding | upstream | 223995 | 9175199 ~ 9175960 (+) |
| G98414 | NA | non-coding | downstream | 1821 | 9403867 ~ 9404218 (+) |
| G98415 | NA | non-coding | downstream | 2321 | 9404367 ~ 9404679 (+) |
| G98416 | NA | non-coding | downstream | 2972 | 9405018 ~ 9405471 (+) |
| G98442 | NA | non-coding | downstream | 71129 | 9473175 ~ 9473571 (+) |
| G98451 | NA | non-coding | downstream | 89279 | 9491325 ~ 9491638 (+) |
| G98288 | NA | other | upstream | 397238 | 8996098 ~ 9002717 (+) |
| G97824 | NA | other | upstream | 1384180 | 8014363 ~ 8015775 (+) |
| CI01000016_07784248_07784757 | TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S | other | upstream | 1614232 | 7783987 ~ 7784996 (+) |
| G96389 | NA | other | upstream | 2238665 | 7160641 ~ 7161290 (+) |
| CI01000016_05405791_05407797 | AICDA | other | upstream | 3992092 | 5405791 ~ 5407963 (+) |
| CI01000016_09796196_09842235 | NA | other | downstream | 393585 | 9795950 ~ 9842576 (+) |
| G99041 | NA | other | downstream | 522372 | 9924418 ~ 9925654 (+) |
| G99410 | NA | other | downstream | 832354 | 10234400 ~ 10236851 (+) |
| G99456 | NA | other | downstream | 892345 | 10294391 ~ 10298904 (+) |
| G99940 | NA | other | downstream | 2269599 | 11671645 ~ 11672873 (+) |
