G98415


Basic Information

Item Value
gene id G98415
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9404367 ~ 9404679 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU111971
GCCTTTTTTGCACCAGATCCATGGGTCCAAAAAGTTCCAGTTTGGTCACATCCCTCCATAAAACATTCTTCCACAACCCCACAGGTATATCCAAATGAATTTAAGCATATTCAAGTCTGCCTTTTATGTTCTTCTTGATCAAGAGTGGTATTCGGCAAAGCTTATGAGCAGAAGAACACCATCTCCAGGGTCAAACATGGAGGTGGTCCAGTCTAGTTATGGTGGAAGCAGAAATCTTGACTGTATGAAGGACATCATTCGTAAGTGCTTCGAATTACTTACCATATGGAGAAACTGGAGGAACTGAAATAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111971 True 313 lncRNA 0.42 1 9404367 9404679

Neighbor

gene id symbol gene type direction distance location
CI01000016_09364728_09366356 VAMP1 coding upstream 38011 9364649 ~ 9366356 (+)
CI01000016_09363759_09363932 NA coding upstream 39994 9363759 ~ 9364373 (+)
CI01000016_09357617_09361063 PSMD4B, PSMD4, PSMD4A coding upstream 43304 9357617 ~ 9361063 (+)
CI01000016_09340494_09349036 PIP5K1A, PIP5K1AB coding upstream 55331 9340494 ~ 9349036 (+)
CI01000016_09317824_09332379 NA coding upstream 71653 9317722 ~ 9332714 (+)
CI01000016_09524279_09527107 NA coding downstream 118938 9523617 ~ 9527207 (+)
CI01000016_09615039_09616082 NA coding downstream 208112 9612791 ~ 9617419 (+)
CI01000016_09663511_09664293 NA coding downstream 258832 9663511 ~ 9664495 (+)
CI01000016_09664848_09674309 CEP192, SEH1L coding downstream 260169 9664848 ~ 9674728 (+)
CI01000016_09686132_09706397 CEP192 coding downstream 281453 9686132 ~ 9706453 (+)
G98414 NA non-coding upstream 149 9403867 ~ 9404218 (+)
G98409 NA non-coding upstream 2321 9399955 ~ 9402046 (+)
G98271 NA non-coding upstream 26317 9376217 ~ 9378050 (+)
G98290 NA non-coding upstream 28814 9326374 ~ 9375553 (+)
G98280 NA non-coding upstream 177459 9224449 ~ 9226908 (+)
G98416 NA non-coding downstream 339 9405018 ~ 9405471 (+)
G98442 NA non-coding downstream 68496 9473175 ~ 9473571 (+)
G98451 NA non-coding downstream 86646 9491325 ~ 9491638 (+)
G98454 NA non-coding downstream 94571 9499250 ~ 9499485 (+)
G98460 NA non-coding downstream 103931 9508610 ~ 9508812 (+)
G98288 NA other upstream 401650 8996098 ~ 9002717 (+)
G97824 NA other upstream 1388592 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1618644 7783987 ~ 7784996 (+)
G96389 NA other upstream 2243077 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 3996504 5405791 ~ 5407963 (+)
CI01000016_09796196_09842235 NA other downstream 390952 9795950 ~ 9842576 (+)
G99041 NA other downstream 519739 9924418 ~ 9925654 (+)
G99410 NA other downstream 829721 10234400 ~ 10236851 (+)
G99456 NA other downstream 889712 10294391 ~ 10298904 (+)
G99940 NA other downstream 2266966 11671645 ~ 11672873 (+)

Expression


Co-expression Network