G98451


Basic Information

Item Value
gene id G98451
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9491325 ~ 9491638 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU112010
TTTAAAATGTAAGGAGTAGAAAGCACAGATAATTGCGTGAAAATGTAAGGAGTAGAAGTAAAAAGTCGGCTGAAAAATAATTACTCCAGTAAAGTATAGATACCCAAAATTTCTACTTAAGTAAGGTAACAAAGTATTTGTACTTCGTTACTTGACACCTCTGACAATGACTGTCATTTGCTGCTATGGATGCAGAACCTGATTTCACCAAGTGCAACTTTTCAATCAACCAATCAGATTTGAGGGACAAGTTTACAGTTTATGTCAAGTTTAGTCTTAAAACCAGGGTTTAGGTATTTCTACATCAGTGTTAT

Function

NR:

description
PREDICTED: methyl-CpG-binding domain protein 3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112010 True 314 lncRNA 0.34 1 9491325 9491638

Neighbor

gene id symbol gene type direction distance location
CI01000016_09364728_09366356 VAMP1 coding upstream 124969 9364649 ~ 9366356 (+)
CI01000016_09363759_09363932 NA coding upstream 126952 9363759 ~ 9364373 (+)
CI01000016_09357617_09361063 PSMD4B, PSMD4, PSMD4A coding upstream 130262 9357617 ~ 9361063 (+)
CI01000016_09340494_09349036 PIP5K1A, PIP5K1AB coding upstream 142289 9340494 ~ 9349036 (+)
CI01000016_09317824_09332379 NA coding upstream 158611 9317722 ~ 9332714 (+)
CI01000016_09524279_09527107 NA coding downstream 31979 9523617 ~ 9527207 (+)
CI01000016_09615039_09616082 NA coding downstream 121153 9612791 ~ 9617419 (+)
CI01000016_09663511_09664293 NA coding downstream 171873 9663511 ~ 9664495 (+)
CI01000016_09664848_09674309 CEP192, SEH1L coding downstream 173210 9664848 ~ 9674728 (+)
CI01000016_09686132_09706397 CEP192 coding downstream 194494 9686132 ~ 9706453 (+)
G98442 NA non-coding upstream 17754 9473175 ~ 9473571 (+)
G98416 NA non-coding upstream 85854 9405018 ~ 9405471 (+)
G98415 NA non-coding upstream 86646 9404367 ~ 9404679 (+)
G98414 NA non-coding upstream 87107 9403867 ~ 9404218 (+)
G98409 NA non-coding upstream 89279 9399955 ~ 9402046 (+)
G98454 NA non-coding downstream 7612 9499250 ~ 9499485 (+)
G98460 NA non-coding downstream 16972 9508610 ~ 9508812 (+)
G98462 NA non-coding downstream 25022 9516660 ~ 9517267 (+)
G98464 NA non-coding downstream 27703 9519341 ~ 9519614 (+)
G98463 NA non-coding downstream 28219 9519857 ~ 9520171 (+)
G98288 NA other upstream 488608 8996098 ~ 9002717 (+)
G97824 NA other upstream 1475550 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1705602 7783987 ~ 7784996 (+)
G96389 NA other upstream 2330035 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 4083462 5405791 ~ 5407963 (+)
CI01000016_09796196_09842235 NA other downstream 303993 9795950 ~ 9842576 (+)
G99041 NA other downstream 432780 9924418 ~ 9925654 (+)
G99410 NA other downstream 742762 10234400 ~ 10236851 (+)
G99456 NA other downstream 802753 10294391 ~ 10298904 (+)
G99940 NA other downstream 2180007 11671645 ~ 11672873 (+)

Expression


Co-expression Network