G98935


Basic Information

Item Value
gene id G98935
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9567985 ~ 9568211 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU112574
ATCAAAATGCTGCGTGTACTCAACCAATCAGCATGTTCAGCGCCCAAGTCCCACCCCGAAATCTTCTGAACTTTGAAAACGTACTACCTCATGAGCAAGGGAAATTTTTACCTGGAACTTCCTAGTTCCTAGGGAAAATTCCTGCTGTGCAAACGCGGCTCATGTTTCTCATATTTTTAAATTAAAATTAACTGCATTCCCTCATGACGGTTTTAAGTCTCTTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112574 True 227 lncRNA 0.41 1 9567985 9568211

Neighbor

gene id symbol gene type direction distance location
CI01000016_09524279_09527107 NA coding upstream 40778 9523617 ~ 9527207 (+)
CI01000016_09364728_09366356 VAMP1 coding upstream 201629 9364649 ~ 9366356 (+)
CI01000016_09363759_09363932 NA coding upstream 203612 9363759 ~ 9364373 (+)
CI01000016_09357617_09361063 PSMD4B, PSMD4, PSMD4A coding upstream 206922 9357617 ~ 9361063 (+)
CI01000016_09340494_09349036 PIP5K1A, PIP5K1AB coding upstream 218949 9340494 ~ 9349036 (+)
CI01000016_09615039_09616082 NA coding downstream 44580 9612791 ~ 9617419 (+)
CI01000016_09663511_09664293 NA coding downstream 95300 9663511 ~ 9664495 (+)
CI01000016_09664848_09674309 CEP192, SEH1L coding downstream 96637 9664848 ~ 9674728 (+)
CI01000016_09686132_09706397 CEP192 coding downstream 117921 9686132 ~ 9706453 (+)
CI01000016_09731997_09734823 NA coding downstream 163786 9731997 ~ 9734823 (+)
G98932 NA non-coding upstream 4526 9563160 ~ 9563459 (+)
G98929 NA non-coding upstream 11391 9556357 ~ 9556594 (+)
G98927 NA non-coding upstream 14047 9553729 ~ 9553938 (+)
G98926 NA non-coding upstream 15486 9552051 ~ 9552499 (+)
G98925 NA non-coding upstream 16142 9551406 ~ 9551843 (+)
G98949 NA non-coding downstream 18018 9586229 ~ 9586568 (+)
G98950 NA non-coding downstream 18901 9587112 ~ 9587313 (+)
G98953 NA non-coding downstream 29264 9597475 ~ 9597714 (+)
G99013 NA non-coding downstream 179772 9747983 ~ 9748261 (+)
G99022 NA non-coding downstream 197767 9765978 ~ 9769724 (+)
G98288 NA other upstream 565268 8996098 ~ 9002717 (+)
G97824 NA other upstream 1552210 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1782262 7783987 ~ 7784996 (+)
G96389 NA other upstream 2406695 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 4160122 5405791 ~ 5407963 (+)
CI01000016_09796196_09842235 NA other downstream 227420 9795950 ~ 9842576 (+)
G99041 NA other downstream 356207 9924418 ~ 9925654 (+)
G99410 NA other downstream 666189 10234400 ~ 10236851 (+)
G99456 NA other downstream 726180 10294391 ~ 10298904 (+)
G99940 NA other downstream 2103434 11671645 ~ 11672873 (+)

Expression


Co-expression Network