G98949


Basic Information

Item Value
gene id G98949
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9586229 ~ 9586568 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU112588
TGTGGTTCTACAACACATACATTTACTTATGTTTTCATACACACAAAAACGTACAACATTGACGTATTTATAGCACTAAAACGTAAAAATACTTACGTATTAACAGCAAAAAAAAAAAAAAAAACGTAAATCATGTAACGTAAAGTGTGAATGTATATGAATTCCCATGTATTAATATTAAATATCGTGGCTTTAATGATTTAACGATGTTTTTAGTCGAATTTATTGAAAGCAGTTTACTCACTTAATATGAAATAACATTTCTGTTCGTGACTTGTGCTGCTCGTTTCGGAGGATTACATAATGTTAAACAAGACTACAATTTGAAACCTTATGAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112588 True 340 lncRNA 0.28 1 9586229 9586568

Neighbor

gene id symbol gene type direction distance location
CI01000016_09524279_09527107 NA coding upstream 59022 9523617 ~ 9527207 (+)
CI01000016_09364728_09366356 VAMP1 coding upstream 219873 9364649 ~ 9366356 (+)
CI01000016_09363759_09363932 NA coding upstream 221856 9363759 ~ 9364373 (+)
CI01000016_09357617_09361063 PSMD4B, PSMD4, PSMD4A coding upstream 225166 9357617 ~ 9361063 (+)
CI01000016_09340494_09349036 PIP5K1A, PIP5K1AB coding upstream 237193 9340494 ~ 9349036 (+)
CI01000016_09615039_09616082 NA coding downstream 26223 9612791 ~ 9617419 (+)
CI01000016_09663511_09664293 NA coding downstream 76943 9663511 ~ 9664495 (+)
CI01000016_09664848_09674309 CEP192, SEH1L coding downstream 78280 9664848 ~ 9674728 (+)
CI01000016_09686132_09706397 CEP192 coding downstream 99564 9686132 ~ 9706453 (+)
CI01000016_09731997_09734823 NA coding downstream 145429 9731997 ~ 9734823 (+)
G98935 NA non-coding upstream 18018 9567985 ~ 9568211 (+)
G98932 NA non-coding upstream 22770 9563160 ~ 9563459 (+)
G98929 NA non-coding upstream 29635 9556357 ~ 9556594 (+)
G98927 NA non-coding upstream 32291 9553729 ~ 9553938 (+)
G98926 NA non-coding upstream 33730 9552051 ~ 9552499 (+)
G98950 NA non-coding downstream 544 9587112 ~ 9587313 (+)
G98953 NA non-coding downstream 10907 9597475 ~ 9597714 (+)
G99013 NA non-coding downstream 161415 9747983 ~ 9748261 (+)
G99022 NA non-coding downstream 179410 9765978 ~ 9769724 (+)
G99023 NA non-coding downstream 183297 9769865 ~ 9773224 (+)
G98288 NA other upstream 583512 8996098 ~ 9002717 (+)
G97824 NA other upstream 1570454 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1800506 7783987 ~ 7784996 (+)
G96389 NA other upstream 2424939 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 4178366 5405791 ~ 5407963 (+)
CI01000016_09796196_09842235 NA other downstream 209063 9795950 ~ 9842576 (+)
G99041 NA other downstream 337850 9924418 ~ 9925654 (+)
G99410 NA other downstream 647832 10234400 ~ 10236851 (+)
G99456 NA other downstream 707823 10294391 ~ 10298904 (+)
G99940 NA other downstream 2085077 11671645 ~ 11672873 (+)

Expression


Co-expression Network