G98953


Basic Information

Item Value
gene id G98953
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9597475 ~ 9597714 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU112592
CAACAGTGTCACGCAGGAAAACTTTAAATATCTCCAAAAAGACATAAAAAAAACTAAACAAATGATTTACAAGTTTAACATGCATTTATCAAAGTAGGAAATCCACACTTTTAATCCTTCACACACAATTAGTGCTCTTGAAATACGAAATGGAGGCGGGTCCGGATTGAATTCCCTCTGAATCCGGACCGGAGTCCGGACTTTGAGAACCCCTGCCCTAAACCAAACCCTAGTCCTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112592 True 240 lncRNA 0.40 1 9597475 9597714

Neighbor

gene id symbol gene type direction distance location
CI01000016_09524279_09527107 NA coding upstream 70268 9523617 ~ 9527207 (+)
CI01000016_09364728_09366356 VAMP1 coding upstream 231119 9364649 ~ 9366356 (+)
CI01000016_09363759_09363932 NA coding upstream 233102 9363759 ~ 9364373 (+)
CI01000016_09357617_09361063 PSMD4B, PSMD4, PSMD4A coding upstream 236412 9357617 ~ 9361063 (+)
CI01000016_09340494_09349036 PIP5K1A, PIP5K1AB coding upstream 248439 9340494 ~ 9349036 (+)
CI01000016_09615039_09616082 NA coding downstream 15077 9612791 ~ 9617419 (+)
CI01000016_09663511_09664293 NA coding downstream 65797 9663511 ~ 9664495 (+)
CI01000016_09664848_09674309 CEP192, SEH1L coding downstream 67134 9664848 ~ 9674728 (+)
CI01000016_09686132_09706397 CEP192 coding downstream 88418 9686132 ~ 9706453 (+)
CI01000016_09731997_09734823 NA coding downstream 134283 9731997 ~ 9734823 (+)
G98950 NA non-coding upstream 10162 9587112 ~ 9587313 (+)
G98949 NA non-coding upstream 10907 9586229 ~ 9586568 (+)
G98935 NA non-coding upstream 29264 9567985 ~ 9568211 (+)
G98932 NA non-coding upstream 34016 9563160 ~ 9563459 (+)
G98929 NA non-coding upstream 40881 9556357 ~ 9556594 (+)
G99013 NA non-coding downstream 150269 9747983 ~ 9748261 (+)
G99022 NA non-coding downstream 168264 9765978 ~ 9769724 (+)
G99023 NA non-coding downstream 172151 9769865 ~ 9773224 (+)
G99024 NA non-coding downstream 187896 9785610 ~ 9786563 (+)
G99034 NA non-coding downstream 258798 9856512 ~ 9856848 (+)
G98288 NA other upstream 594758 8996098 ~ 9002717 (+)
G97824 NA other upstream 1581700 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1811752 7783987 ~ 7784996 (+)
G96389 NA other upstream 2436185 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 4189612 5405791 ~ 5407963 (+)
CI01000016_09796196_09842235 NA other downstream 197917 9795950 ~ 9842576 (+)
G99041 NA other downstream 326704 9924418 ~ 9925654 (+)
G99410 NA other downstream 636686 10234400 ~ 10236851 (+)
G99456 NA other downstream 696677 10294391 ~ 10298904 (+)
G99940 NA other downstream 2073931 11671645 ~ 11672873 (+)

Expression


Co-expression Network