G99022


Basic Information

Item Value
gene id G99022
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9765978 ~ 9769724 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU112671
ATTACTTATATTTATATTTGATATATGCCTATAAATAACAACTTTTTTTAATAGAAAGTCCAATCAGATACACACTGCATAGCAAAAGATGCATTATCAATGTAAAACAGCTGTTAAGGACTGCTCATGTGCATATTATCATATATATCAAGCTATATTTGGAAATCTACACAGAGGATTCATTAAAATCTGCCTCCTCTAGATTGCCAGCAACATCCTTAATGAGCATTGCTGTGAAAATACATGAAACATTTGCAGCCCATTTCACTTCTGTTATGTAATGTTTTTTTCTGAGTGAAACTGCAAATACAAAAAAAAAAAAAAAATGTAGGGTTTGTAGATTTGATTGGATTCTGAAAAATAGGTGTTGCTTACCAGAAATGAGCATTAGTGCATTTGCTCAAACAATGCCTAAATAGCTATTTGTCTAGTGGTTAACATTATCAAGTATGCGGCCTAGGTGATATCATCGGTAAAGGAAAGTTGTTTTAGAGGTGAAGCAAGTTGTTACATTTTGATAAAAGATAATAAGTATATTTGTTTTTAAATTAATCATTCACAGTAAGCCTAGAAACATGTATTATGAAAGTAAATATGGTCAGTTTTGGTTTCATTGTGTTTTAGCCTTTTTGAGCATCATTCATCTGGAGGCATTTTAAAGGTGCAGTATGTAAAACTGACAGCTAGTGGTTGAAATGGGTACTGCAGTCCAAATTCAAAATATTGGAGAGGGTTGTTTCTCTCGCCCCCTCCTCCTCAGACTCAACGCACGCGGGTTGCCAGATTGAGGACCCGCAACAGGAACGAGCGCAAACTGACAATGGAAAGCGACGAGCCTTACACTATAAGTTGATGAGTTGATTTCTCTGCATTTTAATATGCCTCTGAACAAGCGTTTTAGATGGAAGTTGAGGCTTTTTAGGTCGGGTAGAATCTGCGATCTCAGACCTAGTTTGTTTGCTGGCTTCCGTGTCTGCAATACGATCTGTTTTCCACTAAATGGCAACCTGGGGTGTCGAAATACTATTGGGTAAATTGGCAGCGGGCAGAATCACACAAGCCAAAACAAAAACAGACATTCCGACTCGGAGCACACATTTCAAAGTACTGGCTGTAGCATTTTTTTCTGGAAAAACAGTATGTTAACTTAGCATGTTTCCTAAATCTCTGTAAAAATATAATGGTATTTTTGTGCTTTAGTACAGTCAAAAAAATTTCATACAGCACCTTTAACATGTCAAATCCACATCATGAGAATCTGATCACTCATAATCTTTAGCTTCTGAAGGGACTTCGGGAAACATTTAACATATGGTACAACCACAGAGAAAGTCTAAACTTGGTGGGGGAATAAGCCCTCTGGGTTCTGTAAAGTTTCGCAATCTCTTTTTTGCCTTTAGGTTTGTTTTGCTGAACCTTATTTAGCCAGATAGCACCCTGCAGATGGAGGGCATGACCAAGAAAGATGCCCCTAGATAGTGAGGCTTTCATGTGGTCGATACATTTTATCAGAGTTTAAGCTGACATATCATATCGTAATGCTTGATCTGATTTTATTTATTTTTTCATCCACCTTTCTCTCACTCCTCACCCTCTCTTTCCCTCCTCACTCCACTTTTATCTACCAAAGCAAAGCCTGTTTGGAATTTGAAGCATATTTTTAGAAACAAGCTTCTTTGCTGGGCCAAGCATTTGACGTTTTATATTTTAAGGTGGATTTTTATTTGAAGTGAAGAATTTGTAAGTTGTTTTCTCTACAGTTTTACTTTTCTGATATTTATTTGAGATTTTTCATAGCATATTTTCCAAAGAAACAGCAGACTGTGTCTTACAGAAGGCATTAGTTATAAAAGTATTTGAAACATTAATACCTTTAGGCGATCAAGTGTACACTTGGGACTAGAGTAAAATGTCTGTCCCCTTTTTTTCTTTGAATTTTACAGAAAACATCTTTATAATTTCCTGCAAATTTCCAGAATCTTCCACCCTAGTTTCCTATGTTTTTTGGAGATAATACTTTTCTCTTTTAGTAATGTTGGAATACGGAAAACAGTTTACAATCTGCACGTTTCATGAAAGTTTGTCTGATACCGACTGTGAGACTGTGCTATTTTGGAATAGTGCAGAGAAAAGTCCACGAAAGACTCCACCAAAGTCTGCTCGGTTTTTAGAAGTAAGCAGTAAATTTGAGCCTGGTTATCCTTCCAGAGAGAGCTGGTTTGGCTGGCCTCCATCAGCACAGACGGAGGAACGCTGCTTAGAATGACGGAGGCTCATGCCTCAGATTTGTCTTTTTTGAAGGTGCTGATCAACTGCATGATGTCAAGCTGTGTTGTTGCACCAAGTGAATTTTTTCTTTAAAATGTTACACCTTGTTAAAGGATCTCAAAAAAATCTTAATTTACTCTGTCCTTTGAGTACACAAAAGAAGAAGTGCAATGAATATAATGGAGGACTGGTGCTGTTGAGTTTCTTGCACATATTTAAACTTACAGTAGATGCATCACGGCAGTTATTGGAATGTTTTTAATTGAATGTGTTGACTAAATTATGACTAAATTCATTTTTTTGTGTGCAATATTATATTGTTTTATTCCATTTTCTCATTATTCCACAGTAAATGACATGACACTCATTTTTTTGTCCAGATTTAATAATCTGTTCAAAAATACATAAAAATCCAATTCATACATACAGTGACACTTCTTGTATGATGAACATACTTTCTGAATTTAAATTATTTTAGAATTTTTTTGTGGCATTTAAGTTTAAAAATAGCTTAATTAAAAGAACACAATACTTTACCTTTTACCTATTATGCAGAATTCACTTTTATAAGGTGTCTGAACAAAGATGTATATGCACAGTGTGGGTAAACAACCAGCATATAATGGTAAAAATCCTCCTACTCCTTTTTTTGTAATCCCATGAATCATAAGCAGCCTTTCCAAATGAGCTGTTTCAGATTTTCAGGGGGAAGCCCTGCCCATGACTGCTGACGGAATCTGCCCTATTAGCTTAGCCCCTCCTGAATGAGCTGTACAAAGTCCGCCATGTTTATCTCCTCACCAGAGCATTTAACAGCAGCATTCATGTAAGAAATGTACACTAATAAAGCTACTAAAGTTATGTAACCCTTTCACATGTAAGTTTAAAATAATCTAGCTGAGCCCCCAGCGTGAGTTTTTTAAGGCGACCGTTATTTTAGAACGAATCACCTTATTATTTCCATGGCGACGTGTCATGCTTGTCACGTGACACACCGCAGCCACAATAGCGCTGTATGACAGATGTATCGCTTTTATTTAGTTTTTCTTTTTTTATTCAAAATATTCACAAACTTGCGAGCTACATATGTCATCAACTACCTGACATTCTGATTCTCATATAGTGTAAGTGAATGTGTTTTGTTGTTTAAAAACCTTTATAATGATCATGTTAGCTGATCTATAAGGCGCGATGGGTGGCGCAATGTTAGTTCACACCACAATTCAAAGAATCGTATCTATTGGATTTACAACACGTAAATGTATTCACTACATGAAAGTAAGGTGTGATCGTATGTGTCAAAGTTGAGCAGTGAGTGATTTTCTGTTTTTCTTTTGTTGTTTGATTCATATTAACAGCAGCATATGACATGGGGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112671 True 3646 lncRNA 0.36 2 9765978 9769724

Neighbor

gene id symbol gene type direction distance location
CI01000016_09748780_09759954 MRS2 coding upstream 5595 9748780 ~ 9760383 (+)
CI01000016_09731997_09734823 NA coding upstream 31155 9731997 ~ 9734823 (+)
CI01000016_09686132_09706397 CEP192 coding upstream 59525 9686132 ~ 9706453 (+)
CI01000016_09664848_09674309 CEP192, SEH1L coding upstream 91250 9664848 ~ 9674728 (+)
CI01000016_09663511_09664293 NA coding upstream 101483 9663511 ~ 9664495 (+)
CI01000016_09788926_09791625 SDC2 coding downstream 19202 9788926 ~ 9791923 (+)
CI01000016_09796196_09842235 NA coding downstream 26226 9795950 ~ 9842576 (+)
CI01000016_09868120_09886212 NA coding downstream 98352 9868076 ~ 9886233 (+)
CI01000016_09897221_09902690 NA coding downstream 127122 9896846 ~ 9902882 (+)
CI01000016_09934128_09954587 NA coding downstream 164404 9934128 ~ 9955328 (+)
G99013 NA non-coding upstream 17717 9747983 ~ 9748261 (+)
G98953 NA non-coding upstream 168264 9597475 ~ 9597714 (+)
G98950 NA non-coding upstream 178665 9587112 ~ 9587313 (+)
G98949 NA non-coding upstream 179410 9586229 ~ 9586568 (+)
G98935 NA non-coding upstream 197767 9567985 ~ 9568211 (+)
G99023 NA non-coding downstream 141 9769865 ~ 9773224 (+)
G99024 NA non-coding downstream 15886 9785610 ~ 9786563 (+)
G99034 NA non-coding downstream 86788 9856512 ~ 9856848 (+)
G99040 NA non-coding downstream 94279 9864003 ~ 9864223 (+)
G99056 NA non-coding downstream 129829 9899553 ~ 9900079 (+)
G98288 NA other upstream 763261 8996098 ~ 9002717 (+)
G97824 NA other upstream 1750203 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1980255 7783987 ~ 7784996 (+)
G96389 NA other upstream 2604688 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 4358115 5405791 ~ 5407963 (+)
G99041 NA other downstream 154694 9924418 ~ 9925654 (+)
G99410 NA other downstream 464676 10234400 ~ 10236851 (+)
G99456 NA other downstream 524667 10294391 ~ 10298904 (+)
G99940 NA other downstream 1901921 11671645 ~ 11672873 (+)

Expression


Co-expression Network