G99024


Basic Information

Item Value
gene id G99024
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9785610 ~ 9786563 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU112673
TCTGAAACCTACAATGACAAATGGGGCACCCTCTGGTCTTGTGGACACCACAGACACTAGCACATGACTGACAACGTGTGCCATTTGGAATAGGACCGTAGAAACCTGTGGGAAGTCTCTTTCGACTTGGTCCAAGTAGCTGTAGACAATGTACTTAAAGGGATCATGAACAAATGCCAAAGAATCCACAGTGAAATGTACCGAATACAAATAAATAAAGCTCAACTGAGACATTCACATTGTTGAAAATATATAACCATATTCCTAGCATTAGGATCCTTTGAAAGGTAATGTTATTTTTGTCCTGTATCGCTCTTCTCTTCTCCTCATCTCACTAAGACACCAGTGGGCGGGACTAACGTTGCAATGATGAAGTAGGCGTTGATTTCTTCTGCAGAGGCGGCGTTTCACCTATAGATTCATTCCAGGATCAGTTGTCCGCTGTGCCTGGTGTCAATAAAAGCTTTTACTGGACTAACAAGGAAGTTTTCAGTTCCGAAACTTACAGGATATTCTTACAGTACAATGACCTCTTATATATCAAAAAGTTGATTTCCTTGGCACTGTCCCAAATAGCACACTTCATATGCACTTTTATACTTGTGGACTAAGTGATCGTGTCCCTTAAGTCCATGAGACCGTAGGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112673 True 648 lncRNA 0.42 2 9785610 9786563

Neighbor

gene id symbol gene type direction distance location
CI01000016_09748780_09759954 MRS2 coding upstream 25227 9748780 ~ 9760383 (+)
CI01000016_09731997_09734823 NA coding upstream 50787 9731997 ~ 9734823 (+)
CI01000016_09686132_09706397 CEP192 coding upstream 79157 9686132 ~ 9706453 (+)
CI01000016_09664848_09674309 CEP192, SEH1L coding upstream 110882 9664848 ~ 9674728 (+)
CI01000016_09663511_09664293 NA coding upstream 121115 9663511 ~ 9664495 (+)
CI01000016_09788926_09791625 SDC2 coding downstream 2363 9788926 ~ 9791923 (+)
CI01000016_09796196_09842235 NA coding downstream 9387 9795950 ~ 9842576 (+)
CI01000016_09868120_09886212 NA coding downstream 81513 9868076 ~ 9886233 (+)
CI01000016_09897221_09902690 NA coding downstream 110283 9896846 ~ 9902882 (+)
CI01000016_09934128_09954587 NA coding downstream 147565 9934128 ~ 9955328 (+)
G99023 NA non-coding upstream 12386 9769865 ~ 9773224 (+)
G99022 NA non-coding upstream 15886 9765978 ~ 9769724 (+)
G99013 NA non-coding upstream 37349 9747983 ~ 9748261 (+)
G98953 NA non-coding upstream 187896 9597475 ~ 9597714 (+)
G98950 NA non-coding upstream 198297 9587112 ~ 9587313 (+)
G99034 NA non-coding downstream 69949 9856512 ~ 9856848 (+)
G99040 NA non-coding downstream 77440 9864003 ~ 9864223 (+)
G99056 NA non-coding downstream 112990 9899553 ~ 9900079 (+)
G99062 NA non-coding downstream 133704 9920267 ~ 9920479 (+)
G99063 NA non-coding downstream 134618 9921181 ~ 9940824 (+)
G98288 NA other upstream 782893 8996098 ~ 9002717 (+)
G97824 NA other upstream 1769835 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 1999887 7783987 ~ 7784996 (+)
G96389 NA other upstream 2624320 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 4377747 5405791 ~ 5407963 (+)
G99041 NA other downstream 137855 9924418 ~ 9925654 (+)
G99410 NA other downstream 447837 10234400 ~ 10236851 (+)
G99456 NA other downstream 507828 10294391 ~ 10298904 (+)
G99940 NA other downstream 1885082 11671645 ~ 11672873 (+)

Expression


Co-expression Network